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Series GSE246687 Query DataSets for GSE246687
Status Public on Jul 17, 2024
Title Analysis of histone variant H2BE in neuronal chromatin
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary WT and H2BE-KO primary cortical neurons were isolated from E16.5 mice and culture for 12 days for ATAC-sequencing (n=3 WT biological replicates, 4 KO biological replicates).
 
Overall design Emily Feierman
 
Citation(s) 39025074
Submission date Oct 31, 2023
Last update date Oct 16, 2024
Contact name Emily Feierman
E-mail(s) emily.feierman@gmail.com
Organization name University of Pennsylvania
Street address 3400 Civic Center Blvd
City Philadelphia
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (7)
GSM7874610 WT biol rep 1 ATAC-Seq
GSM7874611 WT biol rep 2 ATAC-Seq
GSM7874612 WT biol rep 3 ATAC-Seq
This SubSeries is part of SuperSeries:
GSE246688 CUT&Tag, ATAC-seq, bulk RNA-seq and single-nucleus RNA-seq analysis of histone variant H2BE in cortical neurons
Relations
BioProject PRJNA1034130

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE246687_RAW.tar 1004.2 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA

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