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Series GSE246382 Query DataSets for GSE246382
Status Public on Nov 02, 2023
Title Role of affinity in plasma cell development in the germinal center light zone
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Protective immune responses to many pathogens depend on the development of high affinity antibody-producing plasma cells in germinal centers. Transgenic models suggest that there is a stringent affinity-based barrier to plasma cell development. Whether a similar high affinity barrier regulates plasma cell development under physiologic circumstances, and the nature of the plasma cell fate decision has not been defined precisely. Here we use a fate mapping approach to examine the relationship between germinal center (GC) B cells selected to undergo additional rounds of affinity maturation, germinal center pre-plasma cells and plasma cells. The data show that initial plasma cell selection overlaps with germinal center B cell selection, but that the plasma cell compartment accumulates a less diverse and higher affinity collection of antibodies over time. Thus, whereas the GC continues to diversify over time, affinity-based pre-plasma cell selection sieves the germinal center to enable accumulation of a more restricted group of high affinity antibody secreting plasma cells.
 
Overall design c-Myc-GFP or C57Bl6/J male mice were immunized with NP-Ova in Alhydrogel and GC B cells (LZ and DZ) and Plasma cells were FACS-sorted on day 14
 
Contributor(s) ElTanbouly M, Ramos V, MacLean A, Chen S, Loewe M, Steinbach S, Ben Tanfous T, Johnson B, Cipolla M, Gazumyan A, Oliveira TY, Nussenzweig MC
Citation(s) 37938344
Submission date Oct 26, 2023
Last update date Dec 05, 2023
Contact name Thiago Y Oliveira
E-mail(s) toliveira@rockefeller.edu
Organization name The Rockefeller University
Department Immunology, Virology and Microbiology
Lab Laboratory of Molecular Immunology
Street address 1230 YORK AVE
City NEW YORK
State/province New York
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (44)
GSM7868097 DZ IgL+ M3
GSM7868098 DZ IgL+ M4
GSM7868099 DZ IgL+ M5
Relations
BioProject PRJNA1032633

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE246382_barcodes.tsv.gz 1.9 Kb (ftp)(http) TSV
GSE246382_features.tsv.gz 422.7 Kb (ftp)(http) TSV
GSE246382_trust_annot.fa.gz 216.8 Kb (ftp)(http) FA
GSE246382_trust_report.tsv.gz 45.1 Kb (ftp)(http) TSV
GSE246382_umiDedup-Exact.mtx.gz 14.3 Mb (ftp)(http) MTX
SRA Run SelectorHelp
Raw data are available in SRA

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