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Series GSE245964 Query DataSets for GSE245964
Status Public on Sep 21, 2024
Title Alarmin-loaded extracellular lipid droplets induce airway neutrophil infiltration during type 2 inflammation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary Group 2 innate lymphoid cells (ILC2s) play a crucial role in allergic diseases by coordinating a complex network of various effector cell lineages involved in type 2 inflammation. However, their function in regulating airway neutrophil infiltration, a deleterious symptom of severe asthma, remains unknown. Here, we observed ILC2-dependent neutrophil accumulation in the bronchoalveolar lavage fluid (BALF) of allergic mice models. Chromatography followed by proteomics analysis identified the alarmin high mobility group box-1 (HMGB1) in the supernatant of lung ILC2s initiated neutrophil chemotaxis. Genetic perturbation of Hmgb1 in ILC2s reduced BALF neutrophil numbers and alleviated airway inflammation. HMGB1 was loaded onto the membrane of lipid droplets (LDs) released from activated lung ILC2s. Genetic inhibition of LD accumulation in ILC2s significantly decreased extracellular HMGB1 abundance and BALF neutrophil infiltration. These findings unveil a previously uncharacterized extracellular LD-mediated immune signaling delivery pathway by which ILC2s regulate airway neutrophil infiltration during allergic inflammation.
 
Overall design Bone marrow neutrophils and lung ILC2s were isolated from wildtype (WT) mice in homeostasis for in vitro stimulation and Bulk RNA-seq. ILC-enriched population (CD45+CD3-CD19- cells) was purified from the lungs of Il5cre/+Hilpda+/+ and Il5cre/+Hilpdaflox/flox mice at day 3 after IIL-33 treatment for scRNA-seq.
 
Contributor(s) Rao Z, Liu S, Li Z, Xu H
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Submission date Oct 21, 2023
Last update date Sep 21, 2024
Contact name Heping Xu
E-mail(s) xuheping@westlake.edu.cn
Organization name Westlake University
Street address 18 Shilongshan Road
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310024
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (16)
GSM7852434 Neu_Ctrl_s.n._1
GSM7852435 Neu_Ctrl_s.n._2
GSM7852436 Neu_Ctrl_s.n._3
Relations
BioProject PRJNA1030761

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE245964_ILC2_CtrlNmu23IL25IL33_72h_tpm_matrix.csv.gz 214.8 Kb (ftp)(http) CSV
GSE245964_ILC2_Il5HilpdaIL33_tpm_matrix.csv.gz 335.3 Kb (ftp)(http) CSV
GSE245964_LUNG.raw.cellranger.tar.gz 219.1 Mb (ftp)(http) TAR
GSE245964_Neu_Ctrl_ILC2_s.n_tpm_matrix.csv.gz 131.6 Kb (ftp)(http) CSV
GSE245964_TPMs_allsamples.txt.gz 119 b (ftp)(http) TXT
GSE245964_sc10x.LUNG_only.final_Anno.rds.gz 1.5 Gb (ftp)(http) RDS
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