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GEO accession:
Series GSE245630
Query DataSets for GSE245630
Status
Public on Oct 19, 2023
Title
TIME-Seq Enables Scalable and Inexpensive Epigenetic Age Predictions.
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Methylation profiling by array
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38200273
Submission date
Oct 17, 2023
Last update date
Jan 20, 2024
Contact name
Patrick T Griffin
Organization name
Patrick Griffin
Department
Harvard Medical School, Dept. of Genetics
Lab
Sinclair
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platforms (8)
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GPL15520
Illumina MiSeq (Homo sapiens)
GPL16417
Illumina MiSeq (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL21145
Infinium MethylationEPIC
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
GPL30650
Infinium Mouse Methylation BeadChip
GPL32159
NextSeq 1000 (Mus musculus)
Samples (175)
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GSM7328914
TS-rDNA-clock_rDNABaits_Pool1
GSM7328915
TS-rDNA-clock_rDNABaits_Pool2
GSM7328916
TS-rDNA-clock_rDNABaits_Pool3
GSM7328917
TS-rDNA-clock_rDNABaits_Pool4
GSM7328918
TS-Blood_TrainTest_Pool1
GSM7328919
TS-Blood_TrainTest_Pool2
GSM7328920
TS-Blood_TrainTest_Pool3
GSM7328921
TS-Blood_TrainTest_Pool4
GSM7328922
TS-Blood_TrainTest_Pool5
GSM7328923
TS-Liver_Pool1
GSM7328924
TS-Liver_Pool2
GSM7328925
TS-Muscle-Pool1
GSM7328926
TS-Muscle-Pool2
GSM7328927
TS-Muscle-Pool3
GSM7328928
TS-Muscle-Pool4
GSM7328929
TS-Skin_Pool1
GSM7328930
TS-Skin_Pool2
GSM7328931
TS-TissueClocks_Pool1
GSM7328932
TS-TissueClocks_Pool10
GSM7328933
TS-TissueClocks_Pool2
GSM7328934
TS-TissueClocks_Pool3
GSM7328935
TS-TissueClocks_Pool4
GSM7328936
TS-TissueClocks_Pool5
GSM7328937
TS-TissueClocks_Pool6
GSM7328938
TS-TissueClocks_Pool7
GSM7328939
TS-TissueClocks_Pool8
GSM7328940
TS-TissueClocks_Pool9
GSM7328941
TS-WAT_Pool1
GSM7328942
21-19-Liver-1
GSM7328943
21-19-Liver-2
GSM7328944
21-19-Liver-3
GSM7328945
shallowTS_blood_mouseDiscBaits_Pool1
GSM7328946
shallowTS_blood_mouseDiscBaits_Pool2
GSM7328947
shallowTS_blood_mouseDiscBaits_Pool3
GSM7328948
shallowTS_Liver_mouseDiscBaits_Pool1
GSM7328949
shallowTS_Liver_mouseDiscBaits_Pool2
GSM7328950
shallowTS_Liver_mouseDiscBaits_Pool3
GSM7328951
ShallowTS-Blood_Val_Pool1
GSM7328952
ShallowTS-Blood_Val_Pool2
GSM7328953
TS-BloodClock_Benchmarking
GSM7328954
TS-BloodClock_Val_Pool1
GSM7328955
TS-BloodClock_Val_Pool2
GSM7328956
TS-rDNA-clock_validation_set1
GSM7328957
TS-rDNA-clock_validation_set2
GSM7328958
TS-Blood_DietaryInt_Pool1
GSM7328959
TS-Blood_DietaryInt_Pool2
GSM7328960
TS-Clocks_CellCulture_Pool1
GSM7328961
TS-Clocks_CellCulture_Pool2
GSM7328962
TS-TissueInt_Pool1
GSM7328963
TS-TissueInt_Pool2
GSM7328964
TS-TissueInt_Pool3
GSM7328965
ShallowTS-HumanBlood_Validation_Pool1
GSM7328966
ShallowTS-HumanBlood_Validation_Pool2
GSM7328967
ShallowTS-HumanBlood_Validation_Pool3
GSM7328968
ShallowTS-HumanBlood_Validation_Pool4
GSM7328969
ShallowTS-HumanBlood_Validation_Pool5
GSM7328970
ShallowTS-HumanBlood_Validation_Pool6
GSM7328971
TS-HumanBlood_TrainTest_Pool1
GSM7328972
TS-HumanBlood_TrainTest_Pool10
GSM7328973
TS-HumanBlood_TrainTest_Pool11
GSM7328974
TS-HumanBlood_TrainTest_Pool12
GSM7328975
TS-HumanBlood_TrainTest_Pool13
GSM7328976
TS-HumanBlood_TrainTest_Pool14
GSM7328977
TS-HumanBlood_TrainTest_Pool15
GSM7328978
TS-HumanBlood_TrainTest_Pool16
GSM7328979
TS-HumanBlood_TrainTest_Pool17
GSM7328980
TS-HumanBlood_TrainTest_Pool18
GSM7328981
TS-HumanBlood_TrainTest_Pool2
GSM7328982
TS-HumanBlood_TrainTest_Pool3
GSM7328983
TS-HumanBlood_TrainTest_Pool4
GSM7328984
TS-HumanBlood_TrainTest_Pool5
GSM7328985
TS-HumanBlood_TrainTest_Pool6
GSM7328986
TS-HumanBlood_TrainTest_Pool7
GSM7328987
TS-HumanBlood_TrainTest_Pool8
GSM7328988
TS-HumanBlood_TrainTest_Pool9
GSM7328989
TS-HumanBlood_Validation_Pool1
GSM7328990
TS-HumanBlood_Validation_Pool2
GSM7328991
TS-HumanBlood_Validation_Pool3
GSM7328992
TS-HumanBlood_Validation_Pool4
GSM7328993
TS-HumanBlood_Validation_Pool5
GSM7328994
TS-HumanBlood_Validation_Pool6
GSM7328995
LEAP_TS-Blood_Pool1
GSM7328996
LEAP_TS-Blood_Pool10
GSM7328997
LEAP_TS-Blood_Pool11
GSM7328998
LEAP_TS-Blood_Pool12
GSM7328999
LEAP_TS-Blood_Pool13
GSM7329000
LEAP_TS-Blood_Pool14
GSM7329001
LEAP_TS-Blood_Pool15
GSM7329002
LEAP_TS-Blood_Pool16
GSM7329003
LEAP_TS-Blood_Pool17
GSM7329004
LEAP_TS-Blood_Pool18
GSM7329005
LEAP_TS-Blood_Pool2
GSM7329006
LEAP_TS-Blood_Pool3
GSM7329007
LEAP_TS-Blood_Pool4
GSM7329008
LEAP_TS-Blood_Pool6
GSM7329009
LEAP_TS-Blood_Pool7
GSM7329010
LEAP_TS-Blood_Pool8
GSM7329011
LEAP_TS-Blood_Pool9
GSM7329012
pilot_TIME-Seq_rDNABaitsv1_rep1
GSM7329013
pilot_TIME-Seq_rDNABaitsv1_rep2
GSM7329014
TS-Kidney_Poo1
GSM7329015
TS-Kidney_Poo2
GSM7329016
TS-WAT_Poo2
GSM7846140
Human_Sample_865
GSM7846141
Human_Sample_866
GSM7846142
Human_Sample_870
GSM7846143
Human_Sample_873
GSM7846144
Human_Sample_874
GSM7846145
Human_Sample_878
GSM7846146
Human_Sample_882
GSM7846147
Human_Sample_885
GSM7846148
Human_Sample_888
GSM7846149
Human_Sample_897
GSM7846150
Human_Sample_899
GSM7846151
Human_Sample_931
GSM7846152
Human_Sample_935
GSM7846153
Human_Sample_905
GSM7846154
Human_Sample_910
GSM7846155
Human_Sample_912
GSM7846156
Human_Sample_916
GSM7846157
Human_Sample_920
GSM7846158
Human_Sample_921
GSM7846159
Human_Sample_939
GSM7846160
Human_Sample_945
GSM7846161
Human_Sample_950
GSM7846162
Human_Sample_952
GSM7846163
Human_Sample_955
GSM7846164
Mouse_Sample_1
GSM7846165
Mouse_Sample_2
GSM7846166
Mouse_Sample_3
GSM7846167
Mouse_Sample_4
GSM7846168
Mouse_Sample_5
GSM7846169
Mouse_Sample_6
GSM7846170
Mouse_Sample_7
GSM7846171
Mouse_Sample_8
GSM7846172
Mouse_Sample_9
GSM7846173
Mouse_Sample_10
GSM7846174
Mouse_Sample_11
GSM7846175
Mouse_Sample_12
GSM7846176
Mouse_Sample_13
GSM7846177
Mouse_Sample_14
GSM7846178
Mouse_Sample_15
GSM7846179
Mouse_Sample_16
GSM7846180
Mouse_Sample_17
GSM7846181
Mouse_Sample_18
GSM7846182
Mouse_Sample_19
GSM7846183
Mouse_Sample_20
GSM7846184
Mouse_Sample_21
GSM7846185
Mouse_Sample_22
GSM7846186
Mouse_Sample_23
GSM7846187
Mouse_Sample_24
GSM7846188
Mouse_Sample_25
GSM7846189
Mouse_Sample_26
GSM7846190
Mouse_Sample_27
GSM7846191
Mouse_Sample_28
GSM7846192
Mouse_Sample_29
GSM7846193
Mouse_Sample_30
GSM7846194
Mouse_Sample_31
GSM7846195
Mouse_Sample_32
GSM7846196
Mouse_Sample_33
GSM7846197
Mouse_Sample_34
GSM7846198
Mouse_Sample_35
GSM7846199
Mouse_Sample_36
GSM7846200
Mouse_Sample_37
GSM7846201
Mouse_Sample_38
GSM7846202
Mouse_Sample_39
GSM7846203
Mouse_Sample_40
GSM7846204
Mouse_Sample_41
GSM7846205
Mouse_Sample_42
GSM7846206
Mouse_Sample_43
GSM7846207
Mouse_Sample_44
GSM7846208
Mouse_Sample_45
GSM7846209
Mouse_Sample_46
GSM7846210
Mouse_Sample_47
GSM7846211
Mouse_Sample_48
This SuperSeries is composed of the following SubSeries:
GSE232346
TIME-Seq Enables Scalable and Inexpensive Epigenetic Age Predictions
GSE245628
Methylation microarray data related to TIME-Seq benchmarking
GSE245629
Mouse methylation microarray data related to TIME-Seq benchmarking
Relations
BioProject
PRJNA1029182
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE245630_RAW.tar
756.4 Mb
(http)
(custom)
TAR (of IDAT)
SRA Run Selector
Raw data are available in SRA
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