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Series GSE24518 Query DataSets for GSE24518
Status Public on Jul 01, 2011
Title Co-activation of GR and NF-kB leads to extensive rearrangemnet of their binding sites and target genes
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Global identification of activated GR and p65 binding sites and target genes using ChIP-seq in HeLa B2 cells.
Overall design generation genome-wide chromatin state-maps of GR, p65 and RNAPII in HeLa B2 cells under conditions 1) DMSO (control); 2) TA 1µM 4hr; 3) TNFα 10ng/ml ; 4) TA 1µM 4hr at at third hour 10ng/ml TNF α was added
Contributor(s) McCalman MT, Rao NA, Moulos P, Francoijs K, Chatziioannou A, Kolisis FN, Alexis MN, Mitsiou DJ, Stunnenberg HG
Citation(s) 21750107
Submission date Oct 05, 2010
Last update date May 15, 2019
Contact name H.G. Stunnenberg
Phone +31-24-3610520
Organization name Radboud University
Department Department of Molecular Biology (274)
Street address Geert Grooteplein 28
City Nijmegen
ZIP/Postal code 6525 GA
Country USA
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (20)
GSM604648 GR_DMSO_WT_ChIPseq
GSM604649 GR_TA_WT_ChIPseq
GSM604650 GR_TNFα_WT_ChIPseq
SRA SRP003749
BioProject PRJNA132601

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Supplementary file Size Download File type/resource
GSE24518_RAW.tar 2.1 Gb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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