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Series GSE245148 Query DataSets for GSE245148
Status Public on Oct 07, 2024
Title NSD2 Overexpression in Myeloma Enhances Dependency on Mitochondrial High Energy Phosphate Transport Facilitated by Adenylate Kinase 2 [AS_CR]
Organism Homo sapiens
Experiment type Other
Summary Chromosomal translocation t(4;14), a driver of NSD2 overexpression, remains a negative prognostic factor in multiple myeloma (MM). A genome-wide CRISPR screen in MM cells identified adenylate kinase 2 (AK2) as an NSD2-driven vulnerability. AK2 depletion in t(4;14) MM cells inhibited cell growth in vitro and in vivo, impaired protein folding in the ER and increased sensitivity to proteasome inhibition, consistent with a defect in shuttling ATP from the mitochondria. Moreover, AK2 suppression decreased intracellular NADP(H) critical for thioredoxin reduction, which is key for deoxyribonucleotides (dNTP) synthesis, leading to DNA replication stress and apoptosis. The increased dependence on AK2 was attributed to insufficient creatine production due to NSD2-mediated diversion of one-carbon metabolism to the epigenome and away from S-adenosylmethionine dependent creatine synthesis. Correspondingly, supplementation with creatine restored NADP(H) levels and rescued AK2-deficient cells from apoptosis. These findings revealed a novel metabolic susceptibility and promising therapeutic strategy for targeting t(4;14) MM.
 
Overall design CRISPR Screens/comparison of relative sgRNA abundance between initial and final timepoints in KMS11 NTKO and TKO cells
 
Contributor(s) Sobh A, Encinass E, Patel A, Surapaneni G, Kaestner C, Poullard J, Clerio M, Vasan K, Freeman T, Lv D, Riva A, Barwick BG, Zhou D, Boise LH, Mitsiades CS, Kim B, bennett RL, Chandel NS, Licht JD
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Submission date Oct 12, 2023
Last update date Oct 07, 2024
Contact name Alberto Riva
E-mail(s) ariva@ufl.edu
Organization name University of Florida
Department ICBR
Lab Bioinformatics Core
Street address 2033 Mowry Rd
City Gainesville
State/province FL
ZIP/Postal code 32605
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (8)
GSM7837586 NTKO-23D-1
GSM7837587 NTKO-23D-2
GSM7837588 NTKO-5D-1
This SubSeries is part of SuperSeries:
GSE245150 NSD2 Overexpression in Myeloma Enhances Dependency on Mitochondrial High Energy Phosphate Transport Facilitated by Adenylate Kinase 2.
Relations
BioProject PRJNA1027240

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE245148_raw_counts.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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