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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 11, 2024 |
| Title |
Deterministic reprogramming of neutrophils in tumors |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Web link |
http://10.1126/science.adf6493
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| Citation(s) |
38207030 |
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| Submission date |
Oct 03, 2023 |
| Last update date |
Apr 11, 2024 |
| Contact name |
Melissa Ng |
| E-mail(s) |
melissa.nsf@gmail.com
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| Organization name |
Singapore Immunology Network
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| Street address |
8A Biomedical Grove, #03-06 Immunos Building, Singapore
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| City |
Singapore |
| ZIP/Postal code |
138648 |
| Country |
Singapore |
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| Platforms (3) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
| GPL21273 |
HiSeq X Ten (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (35)
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| GSM7818725 |
Mouse neutrophil subset,OTT TUM,MAT, replicate 1 |
| GSM7818726 |
Mouse neutrophil subset,OTT TUM,IMM, replicate 2 |
| GSM7818727 |
Mouse neutrophil subset,OTT TUM,MAT, replicate 2 |
| GSM7818728 |
Mouse neutrophil subset,OTT TUM,IMM, replicate 3 |
| GSM7818729 |
Mouse neutrophil subset,OTT TUM,MAT, replicate 3 |
| GSM7818730 |
Mouse neutrophil subset,OTT BM,IMM, replicate 1 |
| GSM7818731 |
Mouse neutrophil subset,OTT BM,MAT, replicate 1 |
| GSM7818732 |
Mouse neutrophil subset,OTT BM,IMM, replicate 2 |
| GSM7818733 |
Mouse neutrophil subset,OTT BM,MAT, replicate 2 |
| GSM7818734 |
Mouse neutrophil subset,OTT BM,IMM, replicate 3 |
| GSM7818735 |
Mouse neutrophil subset,OTT BM,MAT, replicate 3 |
| GSM7818736 |
Mouse neutrophil subset,OTT BLD,IMM, replicate 1 |
| GSM7818737 |
Mouse neutrophil subset,OTT BLD,MAT, replicate 1 |
| GSM7818738 |
Mouse neutrophil subset,OTT BLD,IMM, replicate 2 |
| GSM7818739 |
Mouse neutrophil subset,OTT BLD,MAT, replicate 2 |
| GSM7818740 |
Mouse neutrophil subset,OTT BLD,IMM, replicate 3 |
| GSM7818741 |
Mouse neutrophil subset,WT BM,IMM, replicate 1 |
| GSM7818742 |
Mouse neutrophil subset,WT BM,MAT, replicate 1 |
| GSM7818743 |
Mouse neutrophil subset,WT BM,IMM,replicate 2 |
| GSM7818744 |
Mouse neutrophil subset,WT BM,MAT, replicate 2 |
| GSM7818745 |
Mouse neutrophil subset,WT BM,IMM, replicate 3 |
| GSM7818746 |
Mouse neutrophil subset,WT BM,MAT, replicate 3 |
| GSM7818747 |
Mouse neutrophil subset,OTT SPL,IMM, replicate 1 |
| GSM7818748 |
Mouse neutrophil subset,OTT SPL,MAT, replicate 1 |
| GSM7818749 |
Mouse neutrophil subset,OTT SPL,IMM, replicate 2 |
| GSM7818750 |
Mouse neutrophil subset,OTT SPL,MAT, replicate 2 |
| GSM7818751 |
Mouse neutrophil subset,OTT SPL,IMM, replicate 3 |
| GSM7818752 |
Mouse neutrophil subset,OTT SPL,MAT,, replicate 3 |
| GSM7818789 |
XV0001C1_Orthotopic PDAC tumor Replicate 1 (ROI1) |
| GSM7818790 |
XV0001D1_Orthotopic PDAC tumor Replicate 2 (ROI2) |
| GSM7818791 |
XV0008C1_Orthotopic PDAC tumor Biological Replicate (ROI3) |
| GSM7818792 |
XV0008D1 -Orthotopic PDAC tumor Biological Replicate (ROI4) |
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| This SuperSeries is composed of the following SubSeries: |
| GSE243466 |
Single cell RNA profiling of neutrophils in a model of pancreatic orthotopic cancer |
| GSE244531 |
Profiling chromatin accessibility of neutrophil subsets in a mouse model of pancreatic cancer [ATAC-Seq] |
| GSE244534 |
Spatial Transcriptomics of Pancreatic Tumors Reveal Distinct Compartmentalisation of Neutrophil Subsets [Spatial Transcriptomics] |
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| Relations |
| BioProject |
PRJNA1023505 |
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