 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Nov 10, 2023 |
| Title |
CRISPR screening in human trophoblast stem cells reveals both shared and distinct aspects of human and mouse placental development |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
38085778 |
| |
| Submission date |
Sep 28, 2023 |
| Last update date |
Feb 10, 2024 |
| Contact name |
Eri H Kobayashi |
| Organization name |
Tohoku University Graduate School of Medicine
|
| Department |
Medical Biochemistry
|
| Street address |
2-1 Seiryo-machi, Aobaku
|
| City |
Sendai |
| State/province |
Miyagi |
| ZIP/Postal code |
980-8575 |
| Country |
Japan |
| |
|
| Platforms (2) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (65)
|
| GSM7809966 |
hTSC, EVT, DLX3, clone B31, ChIP |
| GSM7809967 |
hTSC, ST, DLX3, clone B31, ChIP |
| GSM7809968 |
hTSC, EVT, GCM1, clone B31, ChIP |
| GSM7809969 |
hTSC, ST, GCM1, clone B31, ChIP |
| GSM7809970 |
hTSC, undifferentiated, clone B31, Input |
| GSM7809971 |
hTSC, EVT, DLX3, clone CT27, ChIP |
| GSM7809972 |
hTSC, ST, DLX3, clone CT27, ChIP |
| GSM7809973 |
hTSC, EVT, GCM1, clone CT27, ChIP |
| GSM7809974 |
hTSC, ST, GCM1, clone CT27, ChIP |
| GSM7809975 |
hTSC, undifferentiated, clone CT27, Input |
| GSM7809976 |
hTSC, undifferentiated, H3K4me3, clone CT27, HiChIP, replicate1 |
| GSM7809977 |
hTSC, undifferentiated, H3K4me3, clone CT27, HiChIP, replicate2 |
| GSM7809978 |
hTSC, undifferentiated, H3K4me3, clone CT27, HiChIP, replicate3 |
| GSM7809979 |
hTSC, undifferentiated, H3K4me3, clone CT27, HiChIP, replicate4 |
| GSM7809980 |
hTSC, undifferentiated, H3K4me3, clone CT27, HiChIP, replicate5 |
| GSM7809981 |
hTSC, undifferentiated, H3K4me3, clone CT27, HiChIP, replicate6 |
| GSM7809982 |
hTSC, EVT, day5, H3K4me3, clone CT27, HiChIP, replicate1 |
| GSM7809983 |
hTSC, EVT, day5, H3K4me3, clone CT27, HiChIP, replicate2 |
| GSM7809984 |
hTSC, EVT, day5, H3K4me3, clone CT27, HiChIP, replicate3 |
| GSM7809985 |
hTSC, EVT, day5, H3K4me3, clone CT27, HiChIP, replicate4 |
| GSM7809986 |
hTSC, EVT, day5, H3K4me3, clone CT27, HiChIP, replicate5 |
| GSM7809987 |
hTSC, ST, day4, H3K4me3, clone CT27, HiChIP, replicate1 |
| GSM7809988 |
hTSC, ST, day4, H3K4me3, clone CT27, HiChIP, replicate2 |
| GSM7809989 |
hTSC, ST, day4, H3K4me3, clone CT27, HiChIP, replicate3 |
| GSM7809990 |
hTSC, ST, day4, H3K4me3, clone CT27, HiChIP, replicate4 |
| GSM7809991 |
hTSC, ST, day4, Hypoxia, H3K4me3, clone CT27, HiChIP, replicate1 |
| GSM7809992 |
hTSC, ST, day4, Hypoxia, H3K4me3, clone CT27, HiChIP, replicate2 |
| GSM7809993 |
hTSC, ST, day4, Hypoxia, H3K4me3, clone CT27, HiChIP, replicate3 |
| GSM7809994 |
hTSC, ST, day4, Hypoxia, H3K4me3, clone CT27, HiChIP, replicate4 |
| GSM7809995 |
hTSC, unmodified, undifferentiated, clone B31 |
| GSM7809996 |
hTSC, unmodified, EVT, day5, clone B31 |
| GSM7809997 |
hTSC, unmodified, EVT, day5, hypoxia, clone B31 |
| GSM7809998 |
hTSC, unmodified, ST, day2, clone B31 |
| GSM7809999 |
hTSC, unmodified, ST, day4, clone B31 |
| GSM7810000 |
hTSC, unmodified, ST, day4, hypoxia, clone B31 |
| GSM7810001 |
hTSC, unmodified, undifferentiated, clone CT27 |
| GSM7810002 |
hTSC, unmodified, EVT, day5, clone CT27 |
| GSM7810003 |
hTSC, unmodified, EVT, day5, hypoxia, clone CT27 |
| GSM7810004 |
hTSC, unmodified, ST, day2, clone CT27 |
| GSM7810005 |
hTSC, unmodified, ST, day4, clone CT27 |
| GSM7810006 |
hTSC, unmodified, ST, day4, hypoxia, clone CT27 |
| GSM7810007 |
hTSC, WT, undifferentiated, clone AAVS-1 |
| GSM7810008 |
hTSC, WT, EVT, day3, clone AAVS-1 |
| GSM7810009 |
hTSC, WT, ST, day2, clone AAVS-1 |
| GSM7810010 |
hTSC, WT, undifferentiated, clone AAVS-2 |
| GSM7810011 |
hTSC, WT, EVT, day3, clone AAVS-2 |
| GSM7810012 |
hTSC, WT, ST, day2, clone AAVS-2 |
| GSM7810013 |
hTSC, DLX3 KO, undifferentiated, clone 1 |
| GSM7810014 |
hTSC, DLX3 KO, EVT, day3, clone 1 |
| GSM7810015 |
hTSC, DLX3 KO, ST, day2, clone 1 |
| GSM7810016 |
hTSC, DLX3 KO, undifferentiated, clone 2 |
| GSM7810017 |
hTSC, DLX3 KO, EVT, day3, clone 2 |
| GSM7810018 |
hTSC, DLX3 KO, ST, day2, clone 2 |
| GSM7810019 |
hTSC, GCM1 KO, undifferentiated, clone 1 |
| GSM7810020 |
hTSC, GCM1 KO, EVT, day3, clone 1 |
| GSM7810021 |
hTSC, GCM1 KO, ST, day2, clone 1 |
| GSM7810022 |
hTSC, GCM1 KO, undifferentiated, clone 2 |
| GSM7810023 |
hTSC, GCM1 KO, EVT, day3, clone 2 |
| GSM7810024 |
hTSC, GCM1 KO, ST, day2, clone 2 |
| GSM7810025 |
hTSC, WT, undifferentiated, clone empty-1 |
| GSM7810026 |
hTSC, WT, EVT, day3, clone empty-1 |
| GSM7810027 |
hTSC, WT, ST, day2, clone empty-1 |
| GSM7810028 |
hTSC, WT, undifferentiated, clone empty-2 |
| GSM7810029 |
hTSC, WT, EVT, day3, clone empty-2 |
| GSM7810030 |
hTSC, WT, ST, day2, clone empty-2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE244252 |
CRISPR screening in human trophoblast stem cells reveals both shared and distinct aspects of human and mouse placental development [ChIP-seq] |
| GSE244253 |
CRISPR screening in human trophoblast stem cells reveals both shared and distinct aspects of human and mouse placental development [HiChIP] |
| GSE244254 |
CRISPR screening in human trophoblast stem cells reveals both shared and distinct aspects of human and mouse placental development [RNA-seq] |
|
| Relations |
| BioProject |
PRJNA1022000 |
|
|
|
|
 |
Less...
More...