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| Status |
Public on Oct 09, 2023 |
| Title |
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis |
| Organism |
Homo sapiens |
| Experiment type |
Other
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
38114474 |
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| Submission date |
Sep 14, 2023 |
| Last update date |
Jan 03, 2024 |
| Contact name |
Stephen Richardson Williams |
| E-mail(s) |
stephen.williams@10xgenomics.com, correspondence@10xgenomics.com
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| Organization name |
10x Genomics
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| Department |
Computational Biology
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| Street address |
6230 Stoneridge Mall Rd
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| City |
Pleasanton |
| State/province |
CA |
| ZIP/Postal code |
94588 |
| Country |
USA |
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| Platforms (2) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
| GPL33762 |
Xenium In Situ Analyzer: Homo sapiens |
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| Samples (7)
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| GSM7780153 |
Breast Cancer, Xenium In Situ Spatial Gene Expression Rep 1 |
| GSM7780154 |
Breast Cancer, Xenium In Situ Spatial Gene Expression Rep 2 |
| GSM7780155 |
Breast Cancer, Xenium In Situ Spatial Gene Expression |
| GSM7782696 |
Breast Cancer, T2N1M0, 5' single-cell |
| GSM7782697 |
Breast Cancer, T2N1M0, 3' single-cell |
| GSM7782698 |
Breast Cancer, Single Cell Gene Expression Flex |
| GSM7782699 |
Breast Cancer, Visium CytAssist Spatial Gene Expression |
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| This SuperSeries is composed of the following SubSeries: |
| GSE243168 |
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [Xenium] |
| GSE243275 |
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [scRNA-seq and Visium] |
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| Relations |
| BioProject |
PRJNA1017511 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE243280_RAW.tar |
31.8 Gb |
(http)(custom) |
TAR (of CLOUPE, CSV, H5, HTML, JSON, TAR, TIFF, TSV, ZIP) |
SRA Run Selector |
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