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Series GSE240231 Query DataSets for GSE240231
Status Public on Sep 14, 2023
Title Formate supplementation enhances anti-tumor CD8+ T cell fitness and efficacy of PD-1 blockade
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Metabolic support of the response to immune checkpoint blockage is unknown. We used scRNA-seq to determine the response of CD8+ cells to metabolic supplementation with the one carbon donor formate in combination with anti-PD-1
 
Overall design Tumor infiltrating CD8+ cells were purified by FACS on day 12 post implantation from B16-OVA tumors after treatment with formate (starting day 9) and antibody (starting day 10). Four treatment groups, control drinking water with isotype control antibody (C.I.), formate drinking water with isotype control antibody (F.I.), control drinking water with anti-PD-1 antibody (C.P.), and formate drinking water with anti-PD-1 antibody (F.P.).
Web link https://aacrjournals.org/cancerdiscovery/article-abstract/doi/10.1158/2159-8290.CD-22-1301/729147/Formate-supplementation-enhances-anti-tumor-CD8-T?redirectedFrom=fulltext
 
Contributor(s) Arlene S, Marcia H, Jared R, Ilaria E
Citation(s) 37728660
Submission date Aug 07, 2023
Last update date Nov 22, 2023
Contact name Osmaan Shahid
E-mail(s) osmaanshahid@gmail.com
Organization name Harvard Medical School
Department Department of Immunology
Lab Sharpe Lab
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (11)
GSM7688513 Control Isotype 1
GSM7688514 Control Isotype 2
GSM7688515 Control Isotype 3
Relations
BioProject PRJNA1003017

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Supplementary file Size Download File type/resource
GSE240231_FilteredIntegratedFinalData.h5ad.gz 264.1 Mb (ftp)(http) H5AD
GSE240231_FilteredIntegratedFinalData.rds.gz 433.5 Mb (ftp)(http) RDS
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Processed data are available on Series record

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