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Series GSE237778 Query DataSets for GSE237778
Status Public on Nov 10, 2023
Title SuperSeries=Mouse neural stem and progenitor cells (NSPC) derived from embryonic stem cells, with biallelic Sox2 enhancer cluster deletions
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Jul 19, 2023
Last update date Nov 11, 2023
Contact name Jennifer Mitchell
E-mail(s) ja.mitchell@utoronto.ca
Phone 4169786711
Organization name University of Toronto
Department Cell and Systems Biology
Street address 25 Harbord Street
City Toronto
State/province Ontario
ZIP/Postal code M5S 3G5
Country Canada
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (20)
GSM7650849 RNA-Seq F1_parent_rep1
GSM7650850 RNA-Seq F1_parent_rep2
GSM7650851 RNA-Seq F1_parent_rep3
This SuperSeries is composed of the following SubSeries:
GSE237775 Bulk RNA-seq of mouse neural stem and progenitor cells (NSPC) derived from embryonic stem cells, with allele-specific deletions of a Sox2 enhancer cluster
GSE237777 Bulk ATAC-seq of mouse neural stem and progenitor cells (NSPC) derived from embryonic stem cells, with biallelic Sox2 enhancer cluster deletions
Relations
BioProject PRJNA996589

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE237778_RAW.tar 2.6 Gb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp

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