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Series GSE236787 Query DataSets for GSE236787
Status Public on Mar 18, 2024
Title A novel model of binge ethanol exposure reveals enhanced neurodegeneration with advanced age
Organism Mus musculus
Experiment type Other
Summary Binge drinking is rising among aged adults (>65 years of age). The distinct effects of binge ethanol exposure on neurodegeneration in the aged brain are not well described. Using our model of intermittent binge ethanol exposure in young and aged mice, we investigated how binge ethanol expoure may promote neurodegenerative diease development. Spatial transcriptomics revealed that binge ethanol exposure enriched neurodegenerative disease pathways in the aged hippocampus, including tau hyperphosphorylation and neuronal death. These data suggest binge drinking during advanced aging may promote neurodegenerative disease development.
 
Overall design Young (3-4 month old) and aged wild type (18-20 month old) female C57BL/6 mice were given intragastric gavages of ethanol (3g/kg) or vehicle every other day for 18 days, totaling 10 exposures. Hippocampal tissue was harvested 18 hours after final gavage for spatial transcriptomics.
 
Contributor(s) Anton PE, Kaufman M, McCullough RL
Citation(s) 38151165
Submission date Jul 07, 2023
Last update date Mar 19, 2024
Contact name paige Anton
E-mail(s) paige.anton@cuanschutz.edu
Phone 2162875367
Organization name University of Colorado Anschutz
Street address 12850 E Monteview Blvd, School of Pharmacy V20-3470D
City Aurora
State/province COLORADO
ZIP/Postal code 80045
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM7576446 Brain, Young Vehicle
GSM7576447 Brain, Young Ethanol
GSM7576448 Brain, Aged Vehicle
Relations
BioProject PRJNA992425

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236787_Aggr_cloupe.cloupe.gz 2.7 Gb (ftp)(http) CLOUPE
GSE236787_RAW.tar 2.3 Gb (http)(custom) TAR (of TIFF)
GSE236787_barcodes.tsv.gz 56.2 Kb (ftp)(http) TSV
GSE236787_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE236787_filtered_feature_bc_matrix.h5 66.7 Mb (ftp)(http) H5
GSE236787_matrix.mtx.gz 183.8 Mb (ftp)(http) MTX
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Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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