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Series GSE235821 Query DataSets for GSE235821
Status Public on Feb 29, 2024
Title β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38211335
Submission date Jun 26, 2023
Last update date Jun 06, 2024
Contact name Eric So
E-mail(s) eric.so@kcl.ac.uk
Organization name KCL
Lab So Lab
Street address School of Cancer and Pharmaceutical Sciences
City London
ZIP/Postal code SE5 9NU
Country United Kingdom
 
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (35)
GSM7510061 Bcat_KO, replicate 1, ATAC-seq
GSM7510062 Bcat_KO, replicate 2, ATAC-seq
GSM7510063 HOXA9_KO, replicate 1, ATAC-seq
This SuperSeries is composed of the following SubSeries:
GSE235815 β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner [ATAC-Seq]
GSE235816 β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner [RNA-seq LSK]
GSE235817 β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner [RNA-seq dKO_HSPCs]
Relations
BioProject PRJNA987671

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235821_RAW.tar 8.9 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp

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