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Series GSE235419 Query DataSets for GSE235419
Status Public on Mar 01, 2024
Title Deficiency of lncRNA MERRICAL abrogates macrophage chemotaxis and alleviates diabetes-associated atherosclerosis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary 1) Differential gene expression profiling of bone marrow derived macrophage treated with GapmeR NS (control) or MERRICAL (KD) in both M0 and M1 phase
 
Overall design M0 and M1 phase bone marrow derived macrophage was treated with GapmeR (NS) and (MERRICAL) for 16 hours, and RNA was collected to compare the transcriptome difference between KD and NS.
Web link https://doi.org/10.1016/j.celrep.2024.113815
 
Contributor(s) Chen J, Feinberg MW
Citation(s) 38428421
Submission date Jun 21, 2023
Last update date Apr 24, 2024
Contact name Jingshu Chen
E-mail(s) ttpsycho7@gmail.com
Organization name Harvard Medical School
Department Medicine
Lab Feinberg Lab
Street address 77 Avenue Louis PasteurBoston
City Boston
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (11)
GSM7502247 M0-BMDM-NS [A1_counts]
GSM7502248 M0-BMDM-NS [A2_counts]
GSM7502249 M0-BMDM-NS [A4_counts]
Relations
BioProject PRJNA986050

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235419_normlaized_counts.csv.gz 1.4 Mb (ftp)(http) CSV
GSE235419_rawcount_new.csv.gz 576.5 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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