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| Status |
Public on Mar 06, 2024 |
| Title |
COP1 controls light-dependent chromatin remodeling in Arabidopsis |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
38349881 |
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| Submission date |
May 23, 2023 |
| Last update date |
Mar 07, 2024 |
| Contact name |
Wenli Wang |
| E-mail(s) |
wenli7898@gmail.com
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| Phone |
7376150810
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| Organization name |
university of Texas at Austin
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| Department |
Molecular Biosciences
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| Lab |
Sung lab
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| Street address |
2506 Speedway NMS 5.268, NMS 5.268
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| City |
Austin |
| State/province |
Texas |
| ZIP/Postal code |
78712 |
| Country |
USA |
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| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
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| Samples (46)
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| GSM7421457 |
col_3 |
| GSM7421458 |
vil1_input |
| GSM7421459 |
vil1_1 |
| GSM7421460 |
vil1_2 |
| GSM7421461 |
vil1_3 |
| GSM7421462 |
cop1_input |
| GSM7421463 |
cop1_1 |
| GSM7421464 |
cop1_2 |
| GSM7421465 |
cop1_3 |
| GSM7421466 |
v1c1_input |
| GSM7421467 |
v1c1_1 |
| GSM7421468 |
v1c1_2 |
| GSM7421469 |
v1c1_3 |
| GSM7421470 |
col_0_1 |
| GSM7421471 |
col_0_2 |
| GSM7421472 |
col_0_3 |
| GSM7421473 |
vil1_0_1 |
| GSM7421474 |
vil1_0_2 |
| GSM7421475 |
vil1_0_3 |
| GSM7421476 |
cop1_0_1 |
| GSM7421477 |
cop1_0_2 |
| GSM7421478 |
cop1_0_3 |
| GSM7421479 |
v1c1_0_1 |
| GSM7421480 |
v1c1_0_2 |
| GSM7421481 |
v1c1_0_3 |
| GSM7421482 |
col_6_1 |
| GSM7421483 |
col_6_2 |
| GSM7421484 |
col_6_3 |
| GSM7421485 |
vil1_6_1 |
| GSM7421486 |
vil1_6_2 |
| GSM7421487 |
vil1_6_3 |
| GSM7421488 |
cop1_6_1 |
| GSM7421489 |
cop1_6_2 |
| GSM7421490 |
cop1_6_3 |
| GSM7421491 |
v1c1_6_1 |
| GSM7421492 |
v1c1_6_2 |
| GSM7421493 |
v1c1_6_3 |
| GSM7470559 |
Seedlings, short day, ZT0, rep1 |
| GSM7470560 |
Seedlings, short day, ZT0, rep2 |
| GSM7470561 |
Seedlings, short day, ZT0, rep3 |
| GSM7470563 |
Seedlings, short day, ZT0, rep1, ChIP |
| GSM7470564 |
Seedlings, short day, ZT0, rep2, ChIP |
| GSM7470565 |
Seedlings, short day, ZT0, rep3, ChIP |
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| This SuperSeries is composed of the following SubSeries: |
| GSE233271 |
COP1 controls light-dependent chromatin remodeling in Arabidopsis [ChIP-Seq] |
| GSE233272 |
COP1 controls light-dependent chromatin remodeling in Arabidopsis [RNA-Seq] |
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| Relations |
| BioProject |
PRJNA975599 |
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