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| Status |
Public on Nov 03, 2023 |
| Title |
Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [scRNA-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Single-cell RNA-Seq was conducted on 19 pediatric high-grade glioma patient samples to study tumor heterogeneity and tumor/immune cell interaction.
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| Overall design |
scRNA-Seq on 19 patient samples of pediatric high grade glioma
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| Contributor(s) |
DeSisto J, Green AL |
| Citation(s) |
37934854 |
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| Submission date |
May 07, 2023 |
| Last update date |
Feb 03, 2024 |
| Contact name |
John DeSisto |
| E-mail(s) |
john.desisto@cuanschutz.edu
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| Phone |
303 905 9916
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| Organization name |
University of Colorado
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| Department |
Pediatrics
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| Lab |
Adam Green
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| Street address |
12800 E 19th Ave
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| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80045 |
| Country |
USA |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (19)
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| GSM7305263 |
Tumor sample 4, scRNA-seq |
| GSM7305264 |
Tumor sample 5, scRNA-seq |
| GSM7305265 |
Tumor sample 6, scRNA-seq |
| GSM7305266 |
Tumor sample 7, scRNA-seq |
| GSM7305267 |
Tumor sample 8, scRNA-seq |
| GSM7305268 |
Tumor sample 9, scRNA-seq |
| GSM7305269 |
Tumor sample 10, scRNA-seq |
| GSM7305270 |
Tumor sample 11, scRNA-seq |
| GSM7305271 |
Tumor sample 12, scRNA-seq |
| GSM7305272 |
Tumor sample 13, scRNA-seq |
| GSM7305273 |
Tumor sample 14, scRNA-seq |
| GSM7305274 |
Tumor sample 15, scRNA-seq |
| GSM7305275 |
Tumor sample 16, scRNA-seq |
| GSM7305276 |
Tumor sample 17, scRNA-seq |
| GSM7305277 |
Tumor sample 18, scRNA-seq |
| GSM7305278 |
Tumor sample 19, scRNA-seq |
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| This SubSeries is part of SuperSeries: |
| GSE231860 |
Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma |
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| Relations |
| BioProject |
PRJNA968165 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE231859_RAW.tar |
193.3 Mb |
(http)(custom) |
TAR (of MTX, TSV) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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