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Series GSE231477 Query DataSets for GSE231477
Status Public on May 29, 2024
Title TWEAK/Fn14 signalling in Breast Cancer [cell line ATAC-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This study explores the transcriptiomic and epigenetic roles of TWEAK/Fn14 signalling in Breast Cancer
 
Overall design Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq) on untreated and TWEAK treated breast cancer cell lines: MDA-MB-231, Hs578T and MCF7
 
Contributor(s) Sim N, Li Y
Citation(s) 38965263
Submission date May 02, 2023
Last update date Sep 09, 2024
Contact name Yinghui Li
E-mail(s) liyh@ntu.edu.sg
Organization name Nanyang Technological University
Department School of Biological Sciences
Lab 05n-21
Street address 60 Nanyang Drive
City Singapore
State/province Singapore
ZIP/Postal code 637551
Country Singapore
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (14)
GSM7286570 MB231_UT_ATAC_rep1
GSM7286571 MB231_UT_ATAC_rep2
GSM7286572 MB231_UT_ATAC_rep3
This SubSeries is part of SuperSeries:
GSE231483 TWEAK/Fn14 signalling in Breast Cancer
Relations
BioProject PRJNA966126

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE231477_RAW.tar 2.3 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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