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GEO accession:
Series GSE231441
Query DataSets for GSE231441
Status
Public on Jul 28, 2023
Title
Cell-specific and shared regulatory elements control a multi-gene locus active in mammary and salivary glands
Organism
Mus musculus
Experiment type
Methylation profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
37591874
,
40163145
Submission date
May 01, 2023
Last update date
Apr 10, 2025
Contact name
Hye Kyung Lee
E-mail(s)
hyekyung.lee@nih.gov
Phone
301-435-6635
Organization name
National Institutes of Health (NIH)
Department
National Institute of Diabetes and Digestive and Kidney (NIDDK)
Lab
Laboratory of Genetics and Physiology
Street address
8 CENTER DR RM 107
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (2)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
Samples (167)
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More...
GSM7282203
WT_Liver_rep1
GSM7282204
WT_Liver_rep2
GSM7282205
WT_Liver_rep3
GSM7282206
WT_MG_L1_rep1
GSM7282208
WT_MG_L1_rep2
GSM7282331
delCsn-SE_SG_H3K27ac_rep1
GSM7282332
delCsn-SE_SG_H3K27ac_rep2
GSM7282333
delCsn-SE_SG_PolII_rep1
GSM7282334
delCsn-SE_SG_PolII_rep2
GSM7282335
delCsn1s1-E1_L1_GR_rep1
GSM7282336
delCsn1s1-E1_L1_GR_rep2
GSM7282337
delCsn1s1-E1_L1_H3K27ac_rep1
GSM7282338
delCsn1s1-E1_L1_H3K27ac_rep2
GSM7282339
delCsn1s1-E1_L1_NFIB_rep1
GSM7282340
delCsn1s1-E1_L1_NFIB_rep2
GSM7282341
delCsn1s1-E1_L1_PolII_rep1
GSM7282343
delCsn1s1-E1_L1_PolII_rep2
GSM7282344
delCsn1s1-E1_L1_STAT5_rep1
GSM7282345
delCsn1s1-E1_L1_STAT5_rep2
GSM7282346
delCsn1s1-E2_L1_GR_rep1
GSM7282347
delCsn1s1-E2_L1_GR_rep2
GSM7282348
delCsn1s1-E2_L1_H3K27ac_rep1
GSM7282349
delCsn1s1-E2_L1_H3K27ac_rep2
GSM7282350
delCsn1s1-E2_L1_NFIB_rep1
GSM7282352
delCsn1s1-E2_L1_NFIB_rep2
GSM7282353
delCsn1s1-E2_L1_PolII_rep1
GSM7282354
delCsn1s1-E2_L1_PolII_rep2
GSM7282355
delCsn1s1-E2_L1_STAT5_rep1
GSM7282356
delCsn1s1-E2_L1_STAT5_rep2
GSM7282357
delCsn2-E1_L1_GR_rep1
GSM7282358
delCsn2-E1_L1_GR_rep2
GSM7282359
delCsn2-E1_L1_H3K27ac_rep1
GSM7282360
delCsn2-E1_L1_H3K27ac_rep2
GSM7282361
delCsn2-E1_L1_PolII_rep1
GSM7282362
delCsn2-E1_L1_PolII_rep2
GSM7282363
delCsn2-E1_L1_STAT5_rep1
GSM7282364
delCsn2-E1_L1_STAT5_rep2
GSM7282365
delCsn2-E23_L1_GR_rep1
GSM7282366
delCsn2-E23_L1_GR_rep2
GSM7282367
delCsn2-E23_L1_H3K27ac_rep1
GSM7282368
delCsn2-E23_L1_H3K27ac_rep2
GSM7282369
delCsn2-E23_L1_PolII_rep1
GSM7282370
delCsn2-E23_L1_PolII_rep2
GSM7282372
delCsn2-E23_L1_STAT5_rep1
GSM7282373
delCsn2-E23_L1_STAT5_rep2
GSM7282374
delCsn2-E123_L1_GR_rep1
GSM7282375
delCsn2-E123_L1_GR_rep2
GSM7282376
delCsn2-E123_L1_H3K27ac_rep1
GSM7282377
delCsn2-E123_L1_H3K27ac_rep2
GSM7282378
delCsn2-E123_L1_PolII_rep1
GSM7282379
delCsn2-E123_L1_PolII_rep2
GSM7282380
delCsn2-E123_L1_STAT5_rep1
GSM7282381
delCsn2-E123_L1_STAT5_rep2
GSM7282382
delCsn2-P_L1_GR_rep1
GSM7282383
delCsn2-P_L1_GR_rep2
GSM7282384
delCsn2-P_L1_H3K27ac_rep1
GSM7282386
delCsn2-P_L1_H3K27ac_rep2
GSM7282387
delCsn2-P_L1_PolII_rep1
GSM7282388
delCsn2-P_L1_PolII_rep2
GSM7282389
delCsn2-P_L1_STAT5_rep1
GSM7282390
delCsn2-P_L1_STAT5_rep2
GSM7282391
delCsn2-P-E123_L1_GR_rep1
GSM7282392
delCsn2-P-E123_L1_H3K27ac_rep1
GSM7282393
delCsn2-P-E123_L1_H3K27ac_rep2
GSM7282394
delCsn2-P-E123_L1_PolII_rep1
GSM7282395
delCsn2-P-E123_L1_PolII_rep2
GSM7282396
delCsn2-P-E123_L1_STAT5_rep1
GSM7282397
delCsn2-P-E123_L1_STAT5_rep2
GSM7282398
delCsn2-P-E123-A_L1_GR_rep1
GSM7282399
delCsn2-P-E123-A_L1_GR_rep2
GSM7282400
delCsn2-P-E123-A_L1_H3K27ac_rep1
GSM7282401
delCsn2-P-E123-A_L1_H3K27ac_rep2
GSM7282403
delCsn2-P-E123-A_L1_PolII_rep1
GSM7282404
delCsn2-P-E123-A_L1_PolII_rep2
GSM7282405
delCsn2-P-E123-A_L1_STAT5_rep1
GSM7282406
delCsn2-P-E123-A_L1_STAT5_rep2
GSM7282407
delCsn2-P-E123-B_L1_GR_rep1
GSM7282408
delCsn2-P-E123-B_L1_GR_rep2
GSM7282409
delCsn2-P-E123-B_L1_H3K27ac_rep1
GSM7282410
delCsn2-P-E123-B_L1_H3K27ac_rep2
GSM7282411
delCsn2-P-E123-B_L1_PolII_rep1
GSM7282412
delCsn2-P-E123-B_L1_PolII_rep2
GSM7282413
delCsn2-P-E123-B_L1_STAT5_rep1
GSM7282414
delCsn2-P-E123-B_L1_STAT5_rep2
GSM7282415
delCsn3-E1_L1_NFIB_rep1
GSM7282416
delCsn3-E1_L1_PolII_rep1
GSM7282417
delCsn3-E1_L1_PolII_rep2
GSM7282418
delCsn3-E2-S_L1_GR_rep1
GSM7282419
delCsn3-E2-S_L1_GR_rep2
GSM7282421
delCsn3-E2-S_L1_H3K27ac_rep1
GSM7282422
delCsn3-E2-S_L1_H3K27ac_rep2
GSM7282423
delCsn3-E2-S_L1_NFIB_rep1
GSM7282424
delCsn3-E2-S_L1_NFIB_rep2
GSM7282425
delCsn3-E2-S_L1_PolII_rep1
GSM7282426
delCsn3-E2-S_L1_PolII_rep2
GSM7282427
delCsn3-E2-S_L1_STAT5_rep1
GSM7282428
delCsn3-E2-S_L1_STAT5_rep2
GSM7282429
delCsn3-E2-SN_L1_GR_rep1
GSM7282430
delCsn3-E2-SN_L1_GR_rep2
GSM7282431
delCsn3-E2-SN_L1_H3K27ac_rep1
GSM7282432
delCsn3-E2-SN_L1_H3K27ac_rep2
GSM7282433
delCsn3-E2-SN_L1_NFIB_rep1
GSM7282434
delCsn3-E2-SN_L1_NFIB_rep2
GSM7282435
delCsn3-E2-SN_L1_PolII_rep1
GSM7282437
delCsn3-E2-SN_L1_PolII_rep2
GSM7282438
delCsn3-E2-SN_L1_STAT5_rep1
GSM7282439
delCsn3-E2-SN_L1_STAT5_rep2
GSM7282440
delOdam_L1_GR_rep1
GSM7282441
delOdam_L1_GR_rep2
GSM7282442
delOdam_L1_H3K27ac_rep1
GSM7282443
delOdam_L1_H3K27ac_rep2
GSM7282444
delOdam_L1_NFIB_rep1
GSM7282445
delOdam_L1_PolII_rep1
GSM7282446
delOdam_L1_PolII_rep2
GSM7282447
delOdam_L1_STAT5_rep1
GSM7282448
delOdam_L1_STAT5_rep2
GSM7282449
delOdam_SG_H3K27ac_rep1
GSM7282450
delOdam_SG_H3K27ac_rep2
GSM7282451
delOdam_SG_PolII_rep1
GSM7282452
delOdam_SG_PolII_rep2
GSM7282453
WT_p6_PolII_rep1
GSM7282454
WT_p6_PolII_rep2
GSM7282455
WT_SG_H3K27ac_rep1
GSM7282456
WT_SG_H3K27ac_rep2
GSM7282458
WT_SG_PolII_rep1
GSM7282459
WT_SG_PolII_rep2
GSM7282460
WT_virMEC_H3K27ac
GSM7282461
WT_virMEC_NFIB
GSM7282462
WT_virMEC_PolII
GSM7282639
delCsn-SE_SG_rep1
GSM7282640
delCsn-SE_SG_rep2
GSM7282641
delCsn-SE_SG_rep3
GSM7282642
delCsn2-E123_L1_rep1
GSM7282643
delCsn2-E123_L1_rep2
GSM7282644
delCsn2-E123_L1_rep3
GSM7282645
delCsn2-E123_L1_rep4
GSM7282647
delCsn2-E123_L10_rep1
GSM7282648
delCsn2-E123_L10_rep2
GSM7282649
delCsn2-P_L1_rep1
GSM7282650
delCsn2-P_L1_rep2
GSM7282651
delCsn2-P_L1_rep3
GSM7282652
delCsn2-P_L10_rep1
GSM7282653
delCsn2-P_L10_rep2
GSM7282654
delCsn2-P_L10_rep3
GSM7282655
delCsn2-P_L10_rep4
GSM7282656
delCsn2-P_Virgin_rep1
GSM7282657
delCsn2-P_Virgin_rep2
GSM7282658
delCsn2-P_Virgin_rep3
GSM7282659
delCsn2-P-E123_L1_rep1
GSM7282660
delCsn2-P-E123_L1_rep2
GSM7282661
delCsn2-P-E123_L1_rep3
GSM7282662
delCsn2-P-E123_L1_rep4
GSM7282663
delCsn2-P-E123_L10_rep1
GSM7282665
delCsn2-P-E123_L10_rep2
GSM7282666
delCsn2-P-E123_L10_rep3
GSM7282667
delCsn2-P-E123_Virgin_rep1
GSM7282668
delCsn2-P-E123_Virgin_rep2
GSM7282669
delCsn2-P-E123_Virgin_rep3
GSM7282670
delOdam_SG_rep1
GSM7282671
delOdam_SG_rep2
GSM7282672
delOdam_SG_rep3
GSM7282673
WT_SG_rep1
GSM7282674
WT_SG_rep2
GSM7282675
WT_SG_rep3
GSM7282676
WT_Virgin_rep1
GSM7282677
WT_Virgin_rep2
GSM7282678
WT_Virgin_rep3
This SuperSeries is composed of the following SubSeries:
GSE231438
Cell-specific and shared regulatory elements control a multi-gene locus active in mammary and salivary glands [Bisulfite-seq]
GSE231439
Cell-specific and shared regulatory elements control a multi-gene locus active in mammary and salivary glands [ChIP-Seq]
GSE231440
Cell-specific and shared regulatory elements control a multi-gene locus active in mammary and salivary glands [RNA-Seq]
Relations
BioProject
PRJNA965824
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE231441_RAW.tar
17.3 Gb
(http)
(custom)
TAR (of TDF, TXT)
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