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Series GSE22967 Query DataSets for GSE22967
Status Public on Apr 01, 2013
Title Genome and transcriptome of the duck
Organism Anas platyrhynchos
Experiment type Expression profiling by high throughput sequencing
Summary The reads of duck transcripome was mapped to the duck genome and help to identify the UTR regions of predicted genes. The expression level difference between the tissue spleen and liver will help us to detect the immune-related and fatty acid metabolism related genes.
 
Overall design Duck transcriptome was sequenced to improve the gene annotation quality, and to detect the differently expressed genes in liver and spleen tissues.
 
Contributor(s) Li N, Huang Y
Citation(s) 23749191
BioProject PRJNA194464
Submission date Jul 15, 2010
Last update date May 15, 2019
Contact name wubin qian
E-mail(s) qianwb@genomics.org.cn
Organization name beijing genomics institute
Street address beishan road
City shenzhen
ZIP/Postal code 518083
Country China
 
Platforms (1)
GPL10692 Illumina Genome Analyzer (Anas platyrhynchos)
Samples (4)
GSM566894 duck_spleen_lane_1
GSM566895 duck_spleen_lane_2
GSM566896 duck_liver_lane_1
Relations
SRA SRP003365

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22967_expression_level.txt.gz 270.1 Kb (ftp)(http) TXT
GSE22967_liver.Genome.MapReadsStat.txt.gz 268 b (ftp)(http) TXT
GSE22967_liver.coverage.txt.gz 254.0 Kb (ftp)(http) TXT
GSE22967_spleen.Genome.MapReadsStat.txt.gz 266 b (ftp)(http) TXT
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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