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Series GSE229129 Query DataSets for GSE229129
Status Public on Jul 05, 2024
Title Conserved transcriptional regulation by BRN1 and BRN2 in neocortical progenitors drives mammalian neural specification and neocortical expansion
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate BRN1/2 function in neocortical development, we knockout BRN1/2 in the dorsal telencephalon (BRN1/2 cKO)
We then performed gene expression profiling analysis using data obtained from scRNA-seq of 13 different mice at E12.5 and E14.5
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for BRN1/2 cKO and control littermates at E12.5 and E14.5
Web link https://doi.org/10.1038%2Fs41467-024-52443-x
 
Contributor(s) Barao S, Xu Y, Llongueras JP, Vistein R, Goff L, Nielsen K, Bae B, Smith RS, Walsh CA, Stein-O'Brien G, Mueller U
Citation(s) 39271675
Submission date Apr 06, 2023
Last update date Oct 06, 2024
Contact name Soraia Barao
Organization name JHU
Department Neuroscience
Lab Mueller
Street address 725 N Wolfe St PCTB 1015
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (13)
GSM7153007 12-5-1_E12.5 Control
GSM7153008 12-5-3_E12.5 BRN1/2 cKO
GSM7153009 14-5-2_E14.5 Control
Relations
BioProject PRJNA953007

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE229129_RAW.tar 1.7 Gb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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