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Series GSE227983 Query DataSets for GSE227983
Status Public on Feb 17, 2025
Title Immune and tumor cell landscape in pediatric high grade gliomas
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Single cell RNA-seq profiling of tumor, myeloid, and T cells from fresh pediatric high grade glioma samples
 
Overall design Gene expression profiling by high throughput single cell RNAseq of 28 patient tumor samples by both SmartSeq2 and 10X Genomics

>>>Submitter states that raw data are not available due to patient privacy concerns<<<
 
Contributor(s) LaBelle J, Poetschke R, Filbin M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 22, 2023
Last update date Feb 17, 2025
Contact name Mariella Filbin
Organization name Dana Farber Cancer Institute
Street address 360 Longwood Ave
City Boston
State/province Massachusetts
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (22)
GSM7111748 H3WT_hemi__P5_R2
GSM7111749 H3WT_hemi__P5_R3
GSM7111750 H3WT_mid_P1
Relations
BioProject PRJNA947620

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227983_immune_ss2_meta.txt.gz 61.2 Kb (ftp)(http) TXT
GSE227983_immune_ss2_tpm.txt.gz 87.9 Mb (ftp)(http) TXT
GSE227983_immune_tenx_meta.txt.gz 386.0 Kb (ftp)(http) TXT
GSE227983_immune_tenx_tpm.txt.gz 390.6 Mb (ftp)(http) TXT
GSE227983_tumor_ss2_meta.txt.gz 34.5 Kb (ftp)(http) TXT
GSE227983_tumor_ss2_tpm.txt.gz 64.1 Mb (ftp)(http) TXT
Raw data not provided for this record
Processed data are available on Series record

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