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Series GSE227109 Query DataSets for GSE227109
Status Public on Jun 14, 2024
Title Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38878775
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 CA237027 Tumor-Suppressive Functions and Molecular Regulation of LRIG1 in Prostate Cancer and CRPC HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE Dean G Tang
R01 CA240290 Novel Therapeutic Strategies to Co-Target Undifferentiated Prostate Cancer (PCa) Stem Cells and Bulk PCa Cells HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE Dean G Tang
R21 CA237939 Correlative efficacy, biomarker, and mechanistic studies associated with a phase Ib/II clinical trial of treating mCRPC patients with enzalutamide and Venetoclax HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE Dean G Tang
R21 CA218635 Slow-cycling cells, therapy resistance and clinical implications in prostate cancer HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE Dean G Tang
P30 CA016056 Roswell Park Cancer Center Support Grant HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE Candace S Johnson
R01 CA238005 Analysis of epithelial heterogeneity in prostate development and cancer Trustees of Columbia University in the City of New York Michael M. Shen
U24 CA274159 Coordinating and Data Management Center for Acquired Resistance to Therapy Network HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE Song Liu
Submission date Mar 10, 2023
Last update date Sep 13, 2024
Contact name Tao Liu
E-mail(s) tao.liu@roswellpark.org
Phone 7168451300
Organization name Roswell Park Comprehensive Cancer Institute
Department Biostatistics and Bioinformatics
Street address Elm and Carlton St
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (24)
GSM7091749 AP2-Intact, replicate 1, scATAC
GSM7091750 AP2-Intact, replicate 2, scATAC
GSM7091751 AP2-Castrated, replicate 1, scATAC
This SuperSeries is composed of the following SubSeries:
GSE227107 Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells (scATAC-seq)
GSE227108 Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells (scRNA-seq)
Relations
BioProject PRJNA943233

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227109_RAW.tar 11.8 Gb (http)(custom) TAR (of H5, TSV)
SRA Run SelectorHelp

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