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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jun 14, 2024 |
Title |
Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells. |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
38878775 |
NIH grant(s) |
Grant ID |
Grant title |
Affiliation |
Name |
R01 CA237027 |
Tumor-Suppressive Functions and Molecular Regulation of LRIG1 in Prostate Cancer and CRPC |
HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE |
Dean G Tang |
R01 CA240290 |
Novel Therapeutic Strategies to Co-Target Undifferentiated Prostate Cancer (PCa) Stem Cells and Bulk PCa Cells |
HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE |
Dean G Tang |
R21 CA237939 |
Correlative efficacy, biomarker, and mechanistic studies associated with a phase Ib/II clinical trial of treating mCRPC patients with enzalutamide and Venetoclax |
HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE |
Dean G Tang |
R21 CA218635 |
Slow-cycling cells, therapy resistance and clinical implications in prostate cancer |
HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE |
Dean G Tang |
P30 CA016056 |
Roswell Park Cancer Center Support Grant |
HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE |
Candace S Johnson |
R01 CA238005 |
Analysis of epithelial heterogeneity in prostate development and cancer |
Trustees of Columbia University in the City of New York |
Michael M. Shen |
U24 CA274159 |
Coordinating and Data Management Center for Acquired Resistance to Therapy Network |
HEALTH RESEARCH INC. AND ROSWELL PARK CANCER INSTITUTE |
Song Liu |
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Submission date |
Mar 10, 2023 |
Last update date |
Sep 13, 2024 |
Contact name |
Tao Liu |
E-mail(s) |
tao.liu@roswellpark.org
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Phone |
7168451300
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Organization name |
Roswell Park Comprehensive Cancer Institute
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Department |
Biostatistics and Bioinformatics
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Street address |
Elm and Carlton St
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City |
Buffalo |
State/province |
NY |
ZIP/Postal code |
14263 |
Country |
USA |
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Platforms (1) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (24)
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GSM7091752 |
AP2-Castrated, replicate 2, scATAC |
GSM7091753 |
AP2-Regenerated, replicate 1, scATAC |
GSM7091754 |
AP2-Regenerated, replicate 2, scATAC |
GSM7091755 |
AP1-Intact, replicate 1, scRNA |
GSM7091756 |
AP1-Intact, replicate 2, scRNA |
GSM7091757 |
AP1-Castrated, replicate 1, scRNA |
GSM7091758 |
AP1-Castrated, replicate 2, scRNA |
GSM7091759 |
DLVP-Intact, replicate 1, scRNA |
GSM7091760 |
DLVP-Intact, replicate 2, scRNA |
GSM7091761 |
DLVP-Intact, replicate 3, scRNA |
GSM7091762 |
DLVP-Intact, replicate 4, scRNA |
GSM7091763 |
DLVP-Castrated, replicate 1, scRNA |
GSM7091764 |
DLVP-Castrated, replicate 2, scRNA |
GSM7091765 |
DLVP-Castrated, replicate 3, scRNA |
GSM7091766 |
DLVP-Castrated, replicate 4, scRNA |
GSM7091767 |
AP2-Intact, replicate 1, scRNA |
GSM7091768 |
AP2-Intact, replicate 2, scRNA |
GSM7091769 |
AP2-Castrated, replicate 1, scRNA |
GSM7091770 |
AP2-Castrated, replicate 2, scRNA |
GSM7091771 |
AP2-Regenerated, replicate 1, scRNA |
GSM7091772 |
AP2-Regenerated, replicate 2, scRNA |
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This SuperSeries is composed of the following SubSeries: |
GSE227107 |
Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells (scATAC-seq) |
GSE227108 |
Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells (scRNA-seq) |
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Relations |
BioProject |
PRJNA943233 |
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