|
| Status |
Public on May 31, 2023 |
| Title |
Significant increase of high-risk chromosome 1q gain and 6q loss at recurrence in posterior fossa group A ependymoma: a multicenter study |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Methylation profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
37246777 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 CA237608 |
Investigation of a Novel Cancer Stem Cell Population in Ependymoma. |
UNIVERSITY OF COLORADO DENVER |
Nicholas K Foreman |
|
| |
| Submission date |
Mar 08, 2023 |
| Last update date |
Jun 03, 2023 |
| Contact name |
Andrew M Donson |
| E-mail(s) |
andrew.donson@cuanschutz.edu
|
| Phone |
303 724 4012
|
| Organization name |
CU Anschutz Medical Campus
|
| Department |
Pediatrics
|
| Lab |
RC1 North, P18-4401M
|
| Street address |
12800 E 19th Ave
|
| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80010 |
| Country |
USA |
| |
|
| Platforms (4)
|
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL21145 |
Infinium MethylationEPIC |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (291)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE226895 |
Epigenetic methylation chip analysis of childhood PFA ependymoma patient samples [EPIC Methylation] |
| GSE226957 |
RNAseq analysis of childhood posterior fossa subgroup A ependymoma |
| GSE226960 |
Epigenetic methylation chip analysis of childhood ependymoma PFA subgroup patient samples [Infinium 450K Methylation Beadchip] |
| GSE227644 |
A multicenter study of poor prognosis chromosome 1q gain and/or 6q loss in posterior fossa A ependymoma shows increased prevalence from 20% at diagnosis to 60% at first recurrence. |
|
| Relations |
| BioProject |
PRJNA942437 |
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