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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Mar 12, 2024 |
| Title |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape. |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| Web link |
https://doi.org/10.1016/j.molcel.2024.02.032
|
| |
|
| Citation(s) |
38521065 |
| |
| Submission date |
Feb 23, 2023 |
| Last update date |
May 15, 2024 |
| Contact name |
MANOJ PILLAI |
| E-mail(s) |
MANOJ.PILLAI@YALE.EDU
|
| Organization name |
YALE UNIVERSITY
|
| Lab |
PILLAI LAB
|
| Street address |
300 GEORGE STREET #786
|
| City |
NEW HAVEN |
| State/province |
CT |
| ZIP/Postal code |
06511 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL21311 |
PacBio RS II (Homo sapiens) |
|
| Samples (170)
|
| GSM7061458 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [LRSseq] |
| GSM7061459 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [LRSseq] |
| GSM7061460 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [LRSseq] |
| GSM7061461 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [LRSseq] |
| GSM7061462 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, ATAC-seq |
| GSM7061463 |
K562 cells, SF3B1 wild type, 4 days, replicate 2, ATAC-seq |
| GSM7061464 |
K562 cells, SF3B1K700E, 4 days, replicate 1, ATAC-seq |
| GSM7061465 |
K562 cells, SF3B1K700E, 4 days, replicate 2, ATAC-seq |
| GSM7061466 |
CD34 cells, healthy volunteer, replicate 1, ATAC-seq |
| GSM7061467 |
CD34 cells, healthy volunteer, replicate 2, ATAC-seq |
| GSM7061468 |
CD34 cells, healthy volunteer, replicate 3, ATAC-seq |
| GSM7061469 |
CD34 cells, SF3B1-mutant MDS, replicate 1, ATAC-seq |
| GSM7061470 |
CD34 cells, SF3B1-mutant MDS, replicate 2, ATAC-seq |
| GSM7061471 |
CD34 cells, SF3B1-mutant MDS, replicate 3, ATAC-seq |
| GSM7061472 |
CD34 cells, SF3B1-mutant MDS, replicate 4, ATAC-seq |
| GSM7061473 |
CD34 cells, SF3B1-mutant MDS, replicate 5, ATAC-seq |
| GSM7061474 |
CD34 cells, SF3B1-mutant MDS, replicate 6, ATAC-seq |
| GSM7061475 |
cKIT+Sca1+Lin- cells, Murine Sf3b1 WT, replicate 1, ATAC-seq |
| GSM7061476 |
cKIT+Sca1+Lin- cells, Murine Sf3b1 K700E, replicate 1, ATAC-seq |
| GSM7061477 |
cKIT+Sca1+Lin- cells, Murine Sf3b1 K700E, replicate 2, ATAC-seq |
| GSM7061478 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IP [CDK9ChIPseq_K562_WT_IP_Replicate1] |
| GSM7061479 |
K562 cells, SF3B1 wild type, 4 days, replicate 2, IP [CDK9ChIPseq_K562_WT_IP_Replicate2] |
| GSM7061480 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, IP [CDK9ChIPseq_K562_SF3B1K700E_IP_Replicate1] |
| GSM7061481 |
K562 cells, SF3B1 K700E, 4 days, replicate 2, IP [CDK9ChIPseq_K562_SF3B1K700E_IP_Replicate2] |
| GSM7061482 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, Input [CDK9ChIPseq_K562_WT_Input_Replicate1] |
| GSM7061483 |
K562 cells, SF3B1 wild type, 4 days, replicate 2, Input [CDK9ChIPseq_K562_WT_Input_Replicate2] |
| GSM7061484 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, Input [CDK9ChIPseq_K562_SF3B1K700E_Input_Replicate1] |
| GSM7061485 |
K562 cells, SF3B1 K700E, 4 days, replicate 2, Input [CDK9ChIPseq_K562_SF3B1K700E_Input_Replicate2] |
| GSM7061486 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [RNAPIINTDChIPseq_K562_WT_Replicate1] |
| GSM7061487 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [RNAPIINTDChIPseq_K562_WT_Replicate2] |
| GSM7061488 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [RNAPIINTDChIPseq_K562_SF3B1K700E_Replicate1] |
| GSM7061489 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [RNAPIINTDChIPseq_K562_SF3B1K700E_Replicate2] |
| GSM7061490 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [TTTLseq_K562_WT_Replicate1] |
| GSM7061491 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [TTTLseq_K562_WT_Replicate2] |
| GSM7061492 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [TTTLseq_K562_SF3B1K700E_Replicate1] |
| GSM7061493 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [TTTLseq_K562_SF3B1K700E_Replicate2] |
| GSM7061494 |
K562 cells, U2AF1 wild type, 4 days, replicate 1 [TTTLseq_K562_U2WT_Replicate1] |
| GSM7061495 |
K562 cells, U2AF1 wild type, 4 days, replicate 2 [TTTLseq_K562_U2WT_Replicate2] |
| GSM7061496 |
K562 cells,U2AF1 S34F, 4 days, replicate 1 [TTTLseq_K562_U2S34F_Replicate1] |
| GSM7061497 |
K562 cells, U2AF1 S34F, 4 days, replicate 2 [TTTLseq_K562_U2S34F_Replicate2] |
| GSM7061498 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [GROseq_K562_WT_Replicate1] |
| GSM7061499 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [GROseq_K562_WT_Replicate2] |
| GSM7061500 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [GROseq_K562_SF3B1K700E_Replicate1] |
| GSM7061501 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [GROseq_K562_SF3B1K700E_Replicate2] |
| GSM7061502 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [nascentSRSseq_K562_WT_Replicate1] |
| GSM7061503 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [nascentSRSseq_K562_WT_Replicate2] |
| GSM7061504 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [nascentSRSseq_K562_SF3B1K700E_Replicate1] |
| GSM7061505 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [nascentSRSseq_K562_SF3B1K700E_Replicate2] |
| GSM7061506 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [DRIPseq_K562_WT_Replicate1] |
| GSM7061507 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [DRIPseq_K562_WT_Replicate2] |
| GSM7061508 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [DRIPseq_K562_SF3B1K700E_Replicate1] |
| GSM7061509 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [DRIPseq_K562_SF3B1K700E_Replicate2] |
| GSM7061510 |
K562 cells, SF3B1 wild type, 4 days, replicate 1 [RNAseq_K562_WT_Replicate1_D4] |
| GSM7061511 |
K562 cells, SF3B1 wild type, 4 days, replicate 2 [RNAseq_K562_WT_Replicate2_D4] |
| GSM7061512 |
K562 cells, SF3B1 K700E, 4 days, replicate 1 [RNAseq_K562_SF3B1K700E_Replicate1_D4] |
| GSM7061513 |
K562 cells, SF3B1 K700E, 4 days, replicate 2 [RNAseq_K562_SF3B1K700E_Replicate2_D4] |
| GSM7061514 |
K562 cells, SF3B1 wild type, 8 days, replicate 1 [RNAseq_K562_WT_Replicate1_D8] |
| GSM7061515 |
K562 cells, SF3B1 wild type, 8 days, replicate 2 [RNAseq_K562_WT_Replicate2_D8] |
| GSM7061516 |
K562 cells, SF3B1 K700E, 8 days, replicate 1 [RNAseq_K562_SF3B1K700E_Replicate1_D8] |
| GSM7061517 |
K562 cells, SF3B1 K700E, 8 days, replicate 2 [RNAseq_K562_SF3B1K700E_Replicate2_D8] |
| GSM7067935 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IP [RNAPIISer2PChIPseq_K562_WT_IP_Replicate1] |
| GSM7067936 |
K562 cells, SF3B1 wild type, 4 days, replicate 2, IP [RNAPIISer2PChIPseq_K562_WT_IP_Replicate2] |
| GSM7067937 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, IP [RNAPIISer2PChIPseq_K562_SF3B1K700E_IP_Replicate1] |
| GSM7067938 |
K562 cells, SF3B1 K700E, 4 days, replicate 2, IP [RNAPIISer2PChIPseq_K562_SF3B1K700E_IP_Replicate2] |
| GSM7067939 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, Input [RNAPIISer2PChIPseq_K562_WT_Input_Replicate1] |
| GSM7067940 |
K562 cells, SF3B1 wild type, 4 days, replicate 2, Input [RNAPIISer2PChIPseq_K562_WT_Input_Replicate2] |
| GSM7067941 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, Input [RNAPIISer2PChIPseq_K562_SF3B1K700E_Input_Replicate1] |
| GSM7067942 |
K562 cells, SF3B1 K700E, 4 days, replicate 2, Input [RNAPIISer2PChIPseq_K562_SF3B1K700E_Input_Replicate2] |
| GSM7067945 |
K562 cells, U2AF1 wild type, 4 days, replicate 1, Input [RNAPIISer2PChIPseq_K562_U2WT_Input] |
| GSM7067946 |
K562 cells, U2AF1 S34F, 4 days, replicate 1, Input [RNAPIISer2PChIPseq_K562_U2S34F_Input] |
| GSM7067947 |
K562 cells, SF3B1 wild type with shScrambled, IP [RNAPIISer2PChIPseq_K562_WT_shScrambled_IP] |
| GSM7067948 |
K562 cells, SF3B1 wild type with shDDX46, IP [RNAPIISer2PChIPseq_K562_WT_shDDX46_IP] |
| GSM7067949 |
K562 cells, SF3B1 wild type with shTATSF1, IP [RNAPIISer2PChIPseq_K562_WT_shHTATSF1_IP] |
| GSM7067950 |
K562 cells, SF3B1 K700E with shScrambled, IP [RNAPIISer2PChIPseq_K562_SF3B1K700E_shScrambled_IP] |
| GSM7067951 |
K562 cells, SF3B1 wild type with shScrambled, Input [RNAPIISer2PChIPseq_K562_WT_shScrambled_Input] |
| GSM7067952 |
K562 cells, SF3B1 wild type with shDDX46, Input [RNAPIISer2PChIPseq_K562_WT_shDDX46_Input] |
| GSM7067953 |
K562 cells, SF3B1 wild type with shTATSF1, Input [RNAPIISer2PChIPseq_K562_WT_shHTATSF1_Input] |
| GSM7067954 |
K562 cells, SF3B1 K700E with shScrambled, Input [RNAPIISer2PChIPseq_K562_SF3B1K700E_shScrambled_Input] |
| GSM7067960 |
K562 cells, SF3B1 K700E, 4 days, shScrambled, IP [RNAPIISer2PChIPseq_SF3B1K700E_shScrambled_IP] |
| GSM7067961 |
K562 cells, SF3B1 K700E, 4 days, shHDAC2, Replicate1, IP [RNAPIISer2PChIPseq_SF3B1K700E_shHDAC2-1_IP] |
| GSM7067962 |
K562 cells, SF3B1 K700E, 4 days, shHDAC2, Replicate2, IP [RNAPIISer2PChIPseq_SF3B1K700E_shHDAC2-2_IP] |
| GSM7067963 |
K562 cells, SF3B1 K700E, 4 days, shING2, Replicate1, IP [RNAPIISer2PChIPseq_SF3B1K700E_shING2-1_IP] |
| GSM7067964 |
K562 cells, SF3B1 K700E, 4 days, shING2,Replicate2, IP [RNAPIISer2PChIPseq_SF3B1K700E_shING2-2_IP] |
| GSM7067965 |
K562 cells, SF3B1 K700E, 4 days, shPHF21A, IP [RNAPIISer2PChIPseq_SF3B1K700E_shPHF21A_IP] |
| GSM7067966 |
K562 cells, SF3B1 K700E, 4 days, shScrambled, Input [RNAPIISer2PChIPseq_SF3B1K700E_shScrambled_Input] |
| GSM7067967 |
K562 cells, SF3B1 K700E, 4 days, shHDAC2, Input [RNAPIISer2PChIPseq_SF3B1K700E_shHDAC2_Input] |
| GSM7067968 |
K562 cells, SF3B1 K700E, 4 days, shING2, Replicate1, Input [RNAPIISer2PChIPseq_SF3B1K700E_shING2-1_Input] |
| GSM7067969 |
K562 cells, SF3B1 K700E, 4 days, shING2,Replicate2, Input [RNAPIISer2PChIPseq_SF3B1K700E_shING2-2_Input] |
| GSM7067970 |
K562 cells, SF3B1 K700E, 4 days, shPHF21A, IP [RNAPIISer2PChIPseq_SF3B1K700E_shPHF21A_Input] |
| GSM7068367 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, H3K4me3 CUT&RUN |
| GSM7068368 |
K562 cells, SF3B1 wild type, 4 days,replicate 2, H3K4me3 CUT&RUN |
| GSM7068369 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, H3K4me3 CUT&RUN |
| GSM7068370 |
K562 cells, SF3B1 K700E, 4 days, replicate 2, H3K4me3 CUT&RUN |
| GSM7068371 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, H3K27me3 CUT&RUN |
| GSM7068372 |
K562 cells, SF3B1 wild type, 4 days, replicate 2, H3K27me3 CUT&RUN |
| GSM7068373 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, H3K27me3 CUT&RUN |
| GSM7068374 |
K562 cells, SF3B1 K700E, 4 days, replicate 2, H3K27me3 CUT&RUN |
| GSM7068375 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, H3K27ac CUT&RUN |
| GSM7068376 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, H3K27ac CUT&RUN |
| GSM7068377 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, H3K4me1 CUT&RUN |
| GSM7068378 |
K562 cells, SF3B1 K700E, 4 days, replicate 1, H3K4me1 CUT&RUN |
| GSM7068379 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IgG CUT&RUN |
| GSM7068380 |
K562 cells, SF3B1 K700E, 4 days, shScrambled, H3K4me3 CUT&RUN |
| GSM7068381 |
K562 cells, SF3B1 K700E, 4 days, shHDAC2, replicate1, H3K4me3 CUT&RUN |
| GSM7068382 |
K562 cells, SF3B1 K700E, 4 days, shHDAC2, replicate2, H3K4me3 CUT&RUN |
| GSM7068383 |
K562 cells, SF3B1 K700E, 4 days, shING2, replicate1, H3K4me3 CUT&RUN |
| GSM7068384 |
K562 cells, SF3B1 K700E, 4 days, shING2, replicate2, H3K4me3 CUT&RUN |
| GSM7068385 |
K562 cells, SF3B1 K700E, 4 days, shPHF21A, H3K4me3 CUT&RUN |
| GSM7068386 |
K562 cells, SF3B1 K700E, 4 days, shScrambled, IgG CUT&RUN |
| GSM7068387 |
CD34 cells, healthy volunteer, replicate 1, H3K4me3CUT&RUN |
| GSM7068388 |
CD34 cells, healthy volunteer, replicate 2, H3K4me3CUT&RUN |
| GSM7068389 |
CD34 cells, healthy volunteer, replicate 3, H3K4me3CUT&RUN |
| GSM7068390 |
CD34 cells, healthy volunteer, replicate 4, H3K4me3CUT&RUN |
| GSM7068391 |
CD34 cells, healthy volunteer, replicate 5, H3K4me3CUT&RUN |
| GSM7068392 |
CD34 cells, SF3B1-mutant MDS, replicate 1, H3K4me3CUT&RUN |
| GSM7068393 |
CD34 cells, SF3B1-mutant MDS, replicate 2, H3K4me3CUT&RUN |
| GSM7068394 |
CD34 cells, SF3B1-mutant MDS, replicate 3, H3K4me3CUT&RUN |
| GSM7068395 |
CD34 cells, SF3B1-mutant MDS, replicate 4, H3K4me3CUT&RUN |
| GSM7068396 |
CD34 cells, SF3B1-mutant MDS, replicate 5, H3K4me3CUT&RUN |
| GSM7068397 |
CD34 cells, healthy volunteer, IgGCUT&RUN |
| GSM7068398 |
CD34 cells, healthy volunteer, replicate 1, Ser2PRNAPII CUT&RUN |
| GSM7068399 |
CD34 cells, healthy volunteer, replicate 2, Ser2PRNAPII CUT&RUN |
| GSM7068400 |
CD34 cells, healthy volunteer, replicate 3, Ser2PRNAPII CUT&RUN |
| GSM7068401 |
CD34 cells, healthy volunteer, replicate 4, Ser2PRNAPII CUT&RUN |
| GSM7068402 |
CD34 cells, healthy volunteer, replicate 5, Ser2PRNAPII CUT&RUN |
| GSM7068403 |
CD34 cells, SF3B1-mutant MDS, replicate 1, Ser2PRNAPII CUT&RUN |
| GSM7068404 |
CD34 cells, SF3B1-mutant MDS, replicate 2, Ser2PRNAPII CUT&RUN |
| GSM7068405 |
CD34 cells, SF3B1-mutant MDS, replicate 3, Ser2PRNAPII CUT&RUN |
| GSM7068406 |
CD34 cells, SF3B1-mutant MDS, replicate 4, Ser2PRNAPII CUT&RUN |
| GSM7068407 |
CD34 cells, SF3B1-mutant MDS, replicate 5, Ser2PRNAPII CUT&RUN |
| GSM7068408 |
CD34 cells, SF3B1-mutant MDS, replicate 6, Ser2PRNAPII CUT&RUN |
| GSM7068409 |
CD34 cells, SF3B1-mutant MDS, replicate 7, Ser2PRNAPII CUT&RUN |
| GSM8057801 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IP (INTS-11) |
| GSM8057802 |
K562 cells, SF3B1 SF3B1K700E, 4 days, replicate 2, IP (INTS-11) |
| GSM8057803 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IP (H3K36me3) |
| GSM8057804 |
K562 cells, SF3B1 SF3B1K700E, 4 days, replicate 2, IP (H3K36me3) |
| GSM8057830 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IP (CHD) |
| GSM8057831 |
K562 cells, SF3B1 SF3B1K700E, 4 days, replicate 2, IP (CHD) |
| GSM8057832 |
K562 cells, SF3B1 wild type, 4 days, replicate 1, IP |
| GSM8057833 |
K562 cells, SF3B1 SF3B1K700E, 4 days, replicate 2, IP |
| GSM8057834 |
Mouse cells, WT, panPol2 CTD |
| GSM8057835 |
Mouse cells, SF3B1 Sf3b1K700E, panPol2 CTD |
| GSM8057836 |
Mouse cells, WT, replicate 1, Ser5P CTD |
| GSM8057837 |
Mouse cells, SF3B1 Sf3b1K700E, replicate 1, Ser5P CTD |
| GSM8057838 |
Mouse cells, WT, replicate 2, Ser5P CTD |
| GSM8057839 |
Mouse cells, SF3B1 Sf3b1K700E, replicate 2, Ser5P CTD |
| GSM8057840 |
Mouse cells, WT, Ser2P CTD |
| GSM8057841 |
Mouse cells, SF3B1 Sf3b1K700E, Ser2P CTD |
| GSM8057842 |
K562 cells, SF3B1 wild type, 4 days, pan Pol II, replicate 1 |
| GSM8057843 |
K562 cells, SF3B1 wild type, 4 days, pan Pol II, replicate 2 |
| GSM8057844 |
K562 cells, SF3B1 K700E, 4 days, pan Pol II, replicate 1 |
| GSM8057845 |
K562 cells, SF3B1 K700E, 4 days, pan Pol II, replicate 2 |
| GSM8057846 |
K562 cells, SF3B1 wild type, 4 days, Ser2P Pol II CTD |
| GSM8057847 |
K562 cells, SF3B1 K700E, 4 days, Ser2P Pol II CTD |
| GSM8057852 |
K562 cells, SF3B1K700E, 4 days, siControl, ATAC-seq |
| GSM8057853 |
K562 cells, SF3B1K700E, 4 days, siHDAC2, ATAC-seq |
| GSM8057854 |
K562 cells, SF3B1K700E, 4 days, siING2, ATAC-seq |
| GSM8057855 |
K562 cells, SF3B1K700E, 4 days, siPHF21A, ATAC-seq |
| GSM8057856 |
K562 cells, SF3B1 wild type overexpression, 8 hours post-induction |
| GSM8057857 |
K562 cells, SF3B1 wild type overexpression, 24 hours post-induction 1 |
| GSM8057858 |
K562 cells, SF3B1 K700E overexpression, 8 hours post-induction |
| GSM8057859 |
K562 cells, SF3B1 K700E overexpression, 24 hours post-induction |
| GSM8057860 |
K562 cells, SF3B1 wild type, siControl |
| GSM8057861 |
K562 cells, SF3B1 wild type, si DDX46 |
| GSM8057862 |
K562 cells, SF3B1 wild type, si HTATSF1 |
| GSM8057863 |
K562 cells, U2AF1 wild type overexpression, 24 hours post induction |
| GSM8057864 |
K562 cells, U2AF1 S34F overexpression, 24 hours post induction |
| GSM8057865 |
K562 cells, SF3B1 wild type overexpression, 24 hours post-induction 2 |
| GSM8057866 |
K562 cells, SF3B1 K666N overexpression, 24 hours post-induction |
| GSM8057867 |
K562 cells, SF3B1 K666R overexpression, 24 hours post-induction |
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE225992 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [Long read sequencing] |
| GSE225993 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [ATAC-seq] |
| GSE225994 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [CUT&RUN] |
| GSE225995 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [Ser2PRNAPII ChIP-seq] |
| GSE225996 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [CDK9-chIP-seq] |
| GSE225997 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [NTD-chIP-seq] |
| GSE225998 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [TT-TL seq] |
| GSE225999 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [GRO-seq] |
| GSE226000 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [nascent RNAseq] |
| GSE226001 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [DRIP-seq] |
| GSE226002 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [RNA-seq] |
| GSE254787 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [INTS-11 ChIP-Seq] |
| GSE254788 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [H3K36me3 ChIP-Seq] |
| GSE254790 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [CHD ChIP-Seq] |
| GSE254791 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [Ser5PRNAPII ChIP-Seq] |
| GSE254792 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [Murine ChIP-Seq] |
| GSE254793 |
Disruption of RNAPII transcription elongation links Oncogenic SFB31 mutations to replciation stress and targetable alterations in chromatin landscape [mNET-Seq] |
| GSE254795 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [ATAC-Seq] |
| GSE254796 |
Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [NTD-Seq] |
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| Relations |
| BioProject |
PRJNA939186 |
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