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| Status |
Public on Feb 23, 2023 |
| Title |
snRNA-seq data on human subcutaneous and omental white adipose tissue |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We generated single nucleus transcriptomic atlas for human subcutaneous and omental white adipose tissue (WAT).
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| Overall design |
Fresh or frozen WAT was used. The nuclei were extracted and snRNA-seq was performed.
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| Contributor(s) |
Zhong J, Massier L, Nono Nankam PA, Wang T |
| Citation(s) |
36922516 |
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| Submission date |
Feb 21, 2023 |
| Last update date |
May 09, 2023 |
| Contact name |
Jiawei Zhong |
| Organization name |
Karolinska Institutet
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| Department |
Department of Medicine, Huddinge
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| Lab |
Mikael Rydén & Niklas Mejhert lab
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| Street address |
Blickagången 16, Flemingsberg
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| City |
Stockholm |
| ZIP/Postal code |
14182 |
| Country |
Sweden |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (9)
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| GSM7054403 |
Cohort_3, subcutaneous |
| GSM7054404 |
Cohort_4, omental, subject_1 |
| GSM7054405 |
Cohort_4, omental, subject_2 |
| GSM7054406 |
Cohort_4, omental, subject_3 |
| GSM7054407 |
Cohort_4, omental, subject_4 |
| GSM7054408 |
Cohort_4, omental, subject_5 |
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| Relations |
| BioProject |
PRJNA937185 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE225700_RAW.tar |
275.6 Mb |
(http)(custom) |
TAR (of MTX, TSV) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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