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Series GSE225500 Query DataSets for GSE225500
Status Public on Jun 28, 2023
Title The nuclear matrix protein MATR3 maintains higher-order chromatin architecture II [Hi-C]
Organism Mus musculus
Experiment type Other
Summary The chromatin structure in eukaryotic nucleus is highly ordered and organized in hierarchical frameworks. We performed Hi-C assay in WT and MATR3-degradated mouse ES cells to reveal the MATR3's role in ES cells.
 
Overall design Two replicates for each sample.
 
Contributor(s) Wen B, Zhang Y, Cao X
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Submission date Feb 16, 2023
Last update date Jun 29, 2023
Contact name Xuan Cao
E-mail(s) caoxuanlucky@126.com
Organization name Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences
Street address 320 Yueyang Road
City Shanghai
ZIP/Postal code 200031
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM7049619 HiC_ESC_Alchol_rep1
GSM7049620 HiC_ESC_Alchol_rep2
GSM7049621 HiC_ESC_M3AID_rep1
This SubSeries is part of SuperSeries:
GSE225502 MATR3 II
Relations
BioProject PRJNA935807

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE225500_RAW.tar 1.1 Gb (http)(custom) TAR (of MATRIX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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