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| Status |
Public on Feb 14, 2023 |
| Title |
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Other
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
38724748 |
| |
| Submission date |
Feb 14, 2023 |
| Last update date |
Jun 28, 2024 |
| Contact name |
Arjun S Nanda |
| Organization name |
Gladstone Institutes / UCSF
|
| Department |
Gladstone Institute for Data Science & Biotechnology
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| Lab |
Ramani Lab
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| Street address |
1700 Owens St
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| City |
San Francisco |
| State/province |
California |
| ZIP/Postal code |
94158 |
| Country |
USA |
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| Platforms (2) |
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| Samples (28)
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| GSM6422266 |
OS152, nuclei, m6dA methylated, rep4 |
| GSM6422267 |
OS152, nuclei, m6dA methylated, rep5 |
| GSM6422268 |
OS152, nuclei, m6dA methylated, rep6 |
| GSM6422269 |
OS152, nuclei, m6dA methylated, rep7 |
| GSM6422270 |
OS152, nuclei, m6dA methylated, rep8 |
| GSM6422271 |
OS152, nuclei, unmethylated, rep1 |
| GSM6422272 |
OS152, nuclei, unmethylated, rep2 |
| GSM6422273 |
OS152, nuclei, unmethylated, rep3 |
| GSM7043910 |
mESC 14, nuclei, m6dA methylated, rep1 |
| GSM7043911 |
mESC 14, nuclei, m6dA methylated, rep2 |
| GSM7043912 |
mESC 14, nuclei, m6dA methylated, rep3 |
| GSM7043913 |
mESC 14, nuclei, m6dA methylated, rep4 |
| GSM7043914 |
mESC 14, nuclei, m6dA methylated, rep5 |
| GSM7043915 |
mESC 14, nuclei, m6dA methylated, rep6 |
| GSM7043916 |
mESC 14, nuclei, m6dA methylated, rep7 |
| GSM7043917 |
mESC 14, nuclei, m6dA methylated, rep8 |
| GSM7043918 |
OS152, nuclei, m6dA methylated, rep1, 2.2 polymerase |
| GSM7043919 |
OS152, nuclei, m6dA methylated, rep2, 2.2 polymerase |
| GSM7043920 |
OS152, nuclei, m6dA methylated, rep3, 2.2 polymerase |
| GSM7043921 |
OS152, nuclei, m6dA methylated, rep4, 2.2 polymerase |
| GSM7043922 |
OS152, nuclei, m6dA methylated, rep5, 2.2 polymerase |
| GSM7043923 |
OS152, nuclei, m6dA methylated, rep6, 2.2 polymerase |
| GSM7043924 |
OS152, nuclei, m6dA methylated, rep7, 2.2 polymerase |
| GSM7043925 |
OS152, nuclei, m6dA methylated, rep8, 2.2 polymerase |
| GSM7851673 |
mESC E14, nuclei, m6dA methylated, ex situ SAMOSA-Tag |
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| This SuperSeries is composed of the following SubSeries:
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| GSE210136 |
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing I |
| GSE225310 |
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing II |
| GSE225311 |
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing III |
| GSE245946 |
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing IV |
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| Relations |
| BioProject |
PRJNA934945 |
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