NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE224389 Query DataSets for GSE224389
Status Public on Oct 11, 2024
Title Immunotherapies that repolarize macrophages and regulatory T cells enhance the effect of chemotherapy in high-grade serous ovarian cancer (Mouse)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We conducted single-cell RNA sequencing (scRNAseq) of tumor-infiltrating immune cells in high-grade serous ovarian cancer (HGSOC) omental biopsies to identify potential targets that could enhance response to neo-adjuvant chemotherapy (NACT). Analysis of 64,097 cells identified NACT-induced overexpression of stabilin-1 (clever-1) on macrophages and FOXP3 in Tregs and these were validated at the protein level. STAB1 inhibition in vitro induced anti-tumor macrophages. FOXP3 anti-sense oligonucleotide (FOXP3-ASO), repolarised Tregs to an effector T cell phenotype.
ScRNAseq on 69,781 cells from an HGSOC syngeneic mouse model recapitulated the patients’ data. Combining chemotherapy with anti-stabilin1 antibody and/or Foxp3-ASO significantly increased survival of mice with established peritoneal disease in two HGSOC syngeneic models and progression-free survival in a third model. Long-term survivors (300 days+) were resistant to tumor rechallenge. Anti-stabilin1 antibody enriched the tumors with CXCL9+ macrophages and Foxp3-ASO increased TBET cell infiltration. Our results suggest targeting these molecules may improve chemotherapy response in patients.

 
Overall design Single cell RNA sequencing on whole omental tumours from HGS2 mouse model. Tumours were harvested from three control mice and 3 mice one week after the third dose of carboplatin and paclitaxel.
Web link http://DOI: 10.1038/s41467-024-54295-x
 
Contributor(s) Elorbany S, Berlato C, Carnevalli LS, Maniati E, Wang J, Barry ST, Manchanda R, Kzhyshkowska J, Balkwill F
Citation(s) 39578450
Submission date Feb 02, 2023
Last update date Jan 18, 2025
Contact name Samar Elorbany
E-mail(s) s.elorbany@qmul.ac.uk
Organization name Queen Mary University of London
Department Tumour Microenvironment
Street address Barbican
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (18)
GSM7021568 scRNA-Seq control_1
GSM7021569 scRNA-Seq control_1_BCR
GSM7021570 scRNA-Seq control_1_TCR
Relations
BioProject PRJNA930760

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224389_RAW.tar 626.3 Mb (http)(custom) TAR (of CSV, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap