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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 13, 2023 |
| Title |
GMP-MoPs display mixed gene expression profiles of both neutrophil and monocyte progenitors [RNAseq mouse] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
This analysis was performed to visualize the distinction between GMP-MoPs and other monocyte and neutrophil progenitors.
Transcription factors differentially expressed between GMP-MoPs and cMoPs were selected.
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for MDPs, cMoPs, GMP, proNeu1, proNeu2, and GMP-MoPs.
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| Contributor(s) |
Ikeda N, Asano K |
| Citation(s) |
36862552 |
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| Submission date |
Jan 31, 2023 |
| Last update date |
Jun 13, 2023 |
| Contact name |
Kenichi Asano |
| E-mail(s) |
asanok@toyaku.ac.jp
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| Organization name |
Tokyo University of Pharmacy and Life Sciences
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| Department |
Life Sciences
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| Lab |
Immune Regulation
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| Street address |
1432-1 Horinouchi
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| City |
Hachioji |
| State/province |
Tokyo |
| ZIP/Postal code |
1920392 |
| Country |
Japan |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (30)
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| GSM7011877 |
Naïve cMoP, bio rep 1 |
| GSM7011878 |
Naïve cMoP, bio rep 2 |
| GSM7011879 |
Naïve cMoP, bio rep 3 |
| GSM7011880 |
Naïve GMP, bio rep 1 |
| GSM7011881 |
Naïve GMP, bio rep 2 |
| GSM7011882 |
Naïve GMP, bio rep 3 |
| GSM7011883 |
Naïve proNeu1, bio rep 1 |
| GSM7011884 |
Naïve proNeu1, bio rep 2 |
| GSM7011885 |
Naïve proNeu1, bio rep 3 |
| GSM7011886 |
Naïve proNeu2, bio rep 1 |
| GSM7011887 |
Naïve proNeu2, bio rep 2 |
| GSM7011888 |
Naïve proNeu2, bio rep 3 |
| GSM7011889 |
Naïve GMP-MoP, bio rep 1 |
| GSM7011890 |
Naïve GMP-MoP, bio rep 2 |
| GSM7011891 |
Naïve GMP-MoP, bio rep 3 |
| GSM7011892 |
LPS GMP, bio rep 1 |
| GSM7011893 |
LPS GMP, bio rep 2 |
| GSM7011894 |
LPS GMP, bio rep 3 |
| GSM7011895 |
LPS proNeu1, bio rep 1 |
| GSM7011896 |
LPS proNeu1, bio rep 2 |
| GSM7011897 |
LPS proNeu1, bio rep 3 |
| GSM7011898 |
LPS proNeu2, bio rep 1 |
| GSM7011899 |
LPS proNeu2, bio rep 2 |
| GSM7011900 |
LPS proNeu2, bio rep 3 |
| GSM7011901 |
LPS GMP-MoP, bio rep 1 |
| GSM7011902 |
LPS GMP-MoP, bio rep 2 |
| GSM7011903 |
LPS GMP-MoP, bio rep 3 |
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| This SubSeries is part of SuperSeries: |
| GSE224702 |
mouse RNA-seq, human RNA-seq, ATAC-seq, and scRNA-seq analyses data |
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| Relations |
| BioProject |
PRJNA929908 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE224102_FPKM.xlsx |
3.9 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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