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Series GSE223669 Query DataSets for GSE223669
Status Public on Jan 24, 2024
Title RNA -seq analysis of cells co-culture with ROS producing cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The the experiment examines the non-cell autnomous effetc og ROS productionn on adjacent cells.
 
Overall design We co-cultured HEK293(+GFP) with ROS producing HEK293 (+DAAO) cells for 10 hr and FACS sorted out the GFP positive cells. We then compared the gene expression profiles of HEK293(+GFP) to HEk293 (+GFP) cells co-culture with ROS producing HEK293(DAAO) cells. Both GFP + WT controls and and ROS-co-culture cells were FASC sorted in this experiment.
 
Contributor(s) Sieber M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 25, 2023
Last update date Jan 24, 2024
Contact name Matt Sieber
E-mail(s) matthew.sieber@utsouthwestern.edu
Phone 2146456036
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines blvd, MC 9040 ND12.214
City Dallas
State/province Texas
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (6)
GSM6970327 ROS-co-cutured cells 1
GSM6970328 ROS-co-cutured cells 2
GSM6970329 ROS-co-cutured cells 3
Relations
BioProject PRJNA927249

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223669_RAW.tar 1.0 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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