NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE223507 Query DataSets for GSE223507
Status Public on Feb 10, 2023
Title The regulative role of DAXX in the gene expression in C9HRE ALS/FTD patient motor neurons
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of DAXX in the C9HRE-associated gene dysregulation inALS/FTD patient-derived motor neurons.
 
Overall design Two pairs of C9HRE ALS/FTD patient iPSCs and their isogenic controls, in which the C9Orf72 HRE mutation was removed, were differentiated into motor neurons. RNA-seq was employed to profile the global gene expression in the isogenic iMNs, C9HRE iMNs, and the C9HRE iMNs treated with shRNA targeting DAXX.
 
Contributor(s) Liu Y, Wang J
Citation(s) 36822200
Submission date Jan 23, 2023
Last update date May 12, 2023
Contact name Yang Liu
E-mail(s) liuyang19870210@outlook.com
Organization name Johns Hopkins University
Department Biochemistry and Molecular Biology
Lab Wang Lab
Street address 615 N. Wolfe Street
City Baltimore
State/province MD
ZIP/Postal code 21211
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM6957780 C9HRE_iMN_1
GSM6957781 C9HRE_iMN_1_shDAXX
GSM6957782 C9HRE_iMN_2
This SubSeries is part of SuperSeries:
GSE223259 Chromatin accessibilities in C9HRE ALS/FTD patient cells
Relations
BioProject PRJNA926611

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223507_RAW.tar 1.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap