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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 30, 2024 |
| Title |
CUT&Tag analysis of R-loops in Ube2t knockdown P19 cells (optimized) |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
DNA sequencing of libraries from CUT&Tag with R-loops antibody (S9.6) in Ube2t knockdown and control P19 cells
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| Overall design |
To understand the role of UBE2T in resolving R-loops. Mouse P19 cells were used. Two kinds of Ube2t knockdown adenovirus were used. No antibody group was regarded as control sample.
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| Contributor(s) |
Yu Y, Zhao S, Yang Y, Xu W |
| Citation(s) |
36928776 |
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| Submission date |
Jan 20, 2023 |
| Last update date |
May 31, 2024 |
| Contact name |
Yongze Yu |
| E-mail(s) |
lwyyzsdu@163.com, lwyyzsdu@hotmail.com
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| Phone |
15668316939
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| Organization name |
Shandong University
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| Street address |
文化西路44号国家辅助生殖与优生工程技术研究中心
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| City |
Jinan |
| State/province |
Shandong |
| ZIP/Postal code |
250000 |
| Country |
China |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA925943 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE223410_RAW.tar |
321.3 Mb |
(http)(custom) |
TAR (of BW, NARROWPEAK) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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