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| Status |
Public on Jun 01, 2023 |
| Title |
Zfp352 over expression ATAC-seq result |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Our data delineated bifurcated binding and regulation of ZFP352 towards two distinct retrotransposons, MT2_Mm and SINE_B1/Alu,and whether ZFP352 can regulate mouse genome openness remains unknown,here we conduct ATAC-seq of Zfp352 over expression sample to detect ZFP352's role in regulating chromatin openness.
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| |
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| Overall design |
Chromatin immunoprecipitation DNA-sequencing (ATAC-seq) for ZFP352 protein of Zfp352 over expression sample and Zfp352+Dux over expression sample
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| |
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| Contributor(s) |
Liang H, Shen Y, Li Z, Xu H |
| Citation(s) |
37339952, 38228612 |
| |
| Submission date |
Jan 11, 2023 |
| Last update date |
Jan 29, 2024 |
| Contact name |
zhengyi Li |
| E-mail(s) |
22018026@zju.edu.cn
|
| Phone |
18637672616
|
| Organization name |
Zhejiang University School of Medicine
|
| Department |
Institute of Genetics
|
| Lab |
HQ lab
|
| Street address |
866 Yuhangtang Rd, Hangzhou
|
| City |
HangZhou |
| State/province |
ZheJiang |
| ZIP/Postal code |
310058 |
| Country |
China |
| |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE222636 |
Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network |
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| Relations |
| BioProject |
PRJNA922926 |
