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Series GSE222532

Query DataSets for GSE222532

Status

Public on May 29, 2024

Title

Follicular lymphoma regulatory T cell origin and function

Organism

Experiment type

Expression profiling by array

Summary

GeneChip Human Transcriptome Array 2.0 of sorted T cells from human tonsils or follicular lymphoma

Overall design

We analyzed sorted Naive CD4, Memory CD4, Tfh, Treg from 3 human tonsils and Naive CD4, Memory CD4, Tfh, Tfr from 3 human follicular lymphoma. CDNA were hybridized on GeneChip Human Transcriptome Array 2.0. CEL files were processed with Affymetrix Expression Console software 1.3.1 using RMA and default settings.

Contributor(s)

Rodriguez S, Alizadeh M, Lamaison C, Saintamand A, Monvoisin C, Jean R, Deleurme L, Martin-Subero I, Pangault C, Tarte K, Amé-Thomas P

Citation(s)

Submission date

Jan 10, 2023

Last update date

May 30, 2024

Contact name

Stephane Rodriguez

E-mail(s)

stephane.rodriguez@univ-rennes1.fr

Organization name

INSERM

Lab

U1236

Street address

2, Av Pr. Leon Bernard

City

Rennes

State/province

France

ZIP/Postal code

35000

Country

France

Platforms (2)

GPL17585	[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [probe set (exon) version]
GPL17586	[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]

Samples (48)

More...

GSM6925600	Human tonsil Tfh exon-level [PGD_905_HTA]
GSM6925601	Human tonsil Naive CD4 exon-level [PGD_906_HTA]
GSM6925602	Human tonsil Treg exon-level [PGD_907_HTA]

GSM6925603	Human tonsil Memory CD4 exon-level [PGD_908_HTA]
GSM6925604	Human tonsil Tfh exon-level [PGD_909_HTA]
GSM6925605	Human tonsil Naive CD4 exon-level [PGD_910_HTA]
GSM6925606	Human tonsil Treg exon-level [PGD_911_HTA]
GSM6925607	Human tonsil Memory CD4 exon-level [PGD_912_HTA]
GSM6925608	Human FL Tfh exon-level [PGD_913_HTA]
GSM6925609	Human FL Naive CD4 exon-level [PGD_914_HTA]
GSM6925610	Human FL Tfr exon-level [PGD_915_HTA]
GSM6925611	Human FL Memory CD4 exon-level [PGD_916_HTA]
GSM6925612	Human tonsil Tfh exon-level [PGD_917_HTA]
GSM6925613	Human tonsil Naive CD4 exon-level [PGD_918_HTA]
GSM6925614	Human tonsil Treg exon-level [PGD_919_HTA]
GSM6925615	Human tonsil Memory CD4 exon-level [PGD_920_HTA]
GSM6925616	Human FL Tfh exon-level [PGD_925_HTA]
GSM6925617	Human FL Naive CD4 exon-level [PGD_926_HTA]
GSM6925618	Human FL Tfr exon-level [PGD_927_HTA]
GSM6925619	Human FL Memory CD4 exon-level [PGD_928_HTA]
GSM6925620	Human FL Tfh exon-level [PGD_929_HTA]
GSM6925621	Human FL Naive CD4 exon-level [PGD_930_HTA]
GSM6925622	Human FL Tfr exon-level [PGD_931_HTA]
GSM6925623	Human FL Memory CD4 exon-level [PGD_932_HTA]
GSM6925624	Human tonsil Tfh gene-level [PGD_905_HTA]
GSM6925625	Human tonsil Naive CD4 gene-level [PGD_906_HTA]
GSM6925626	Human tonsil Treg gene-level [PGD_907_HTA]
GSM6925627	Human tonsil Memory CD4 gene-level [PGD_908_HTA]
GSM6925628	Human tonsil Tfh gene-level [PGD_909_HTA]
GSM6925629	Human tonsil Naive CD4 gene-level [PGD_910_HTA]
GSM6925630	Human tonsil Treg gene-level [PGD_911_HTA]
GSM6925631	Human tonsil Memory CD4 gene-level [PGD_912_HTA]
GSM6925632	Human FL Tfh gene-level [PGD_913_HTA]
GSM6925633	Human FL Naive CD4 gene-level [PGD_914_HTA]
GSM6925634	Human FL Tfr gene-level [PGD_915_HTA]
GSM6925635	Human FL Memory CD4 gene-level [PGD_916_HTA]
GSM6925636	Human tonsil Tfh gene-level [PGD_917_HTA]
GSM6925637	Human tonsil Naive CD4 gene-level [PGD_918_HTA]
GSM6925638	Human tonsil Treg gene-level [PGD_919_HTA]
GSM6925639	Human tonsil Memory CD4 gene-level [PGD_920_HTA]
GSM6925640	Human FL Tfh gene-level [PGD_925_HTA]
GSM6925641	Human FL Naive CD4 gene-level [PGD_926_HTA]
GSM6925642	Human FL Tfr gene-level [PGD_927_HTA]
GSM6925643	Human FL Memory CD4 gene-level [PGD_928_HTA]
GSM6925644	Human FL Tfh gene-level [PGD_929_HTA]
GSM6925645	Human FL Naive CD4 gene-level [PGD_930_HTA]
GSM6925646	Human FL Tfr gene-level [PGD_931_HTA]
GSM6925647	Human FL Memory CD4 gene-level [PGD_932_HTA]

Relations

BioProject

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE222532_PGD_905_HTA.CEL.gz	23.3 Mb	(ftp)(http)	CEL
GSE222532_PGD_906_HTA.CEL.gz	23.9 Mb	(ftp)(http)	CEL
GSE222532_PGD_907_HTA.CEL.gz	24.2 Mb	(ftp)(http)	CEL
GSE222532_PGD_908_HTA.CEL.gz	23.9 Mb	(ftp)(http)	CEL
GSE222532_PGD_909_HTA.CEL.gz	24.3 Mb	(ftp)(http)	CEL
GSE222532_PGD_910_HTA.CEL.gz	23.5 Mb	(ftp)(http)	CEL
GSE222532_PGD_911_HTA.CEL.gz	24.5 Mb	(ftp)(http)	CEL
GSE222532_PGD_912_HTA.CEL.gz	24.0 Mb	(ftp)(http)	CEL
GSE222532_PGD_913_HTA.CEL.gz	24.4 Mb	(ftp)(http)	CEL
GSE222532_PGD_914_HTA.CEL.gz	24.1 Mb	(ftp)(http)	CEL
GSE222532_PGD_915_HTA.CEL.gz	24.1 Mb	(ftp)(http)	CEL
GSE222532_PGD_916_HTA.CEL.gz	23.1 Mb	(ftp)(http)	CEL
GSE222532_PGD_917_HTA.CEL.gz	23.7 Mb	(ftp)(http)	CEL
GSE222532_PGD_918_HTA.CEL.gz	23.7 Mb	(ftp)(http)	CEL
GSE222532_PGD_919_HTA.CEL.gz	24.1 Mb	(ftp)(http)	CEL
GSE222532_PGD_920_HTA.CEL.gz	23.5 Mb	(ftp)(http)	CEL
GSE222532_PGD_925_HTA.CEL.gz	22.8 Mb	(ftp)(http)	CEL
GSE222532_PGD_926_HTA.CEL.gz	22.9 Mb	(ftp)(http)	CEL
GSE222532_PGD_927_HTA.CEL.gz	23.9 Mb	(ftp)(http)	CEL
GSE222532_PGD_928_HTA.CEL.gz	23.7 Mb	(ftp)(http)	CEL
GSE222532_PGD_929_HTA.CEL.gz	23.4 Mb	(ftp)(http)	CEL
GSE222532_PGD_930_HTA.CEL.gz	23.7 Mb	(ftp)(http)	CEL
GSE222532_PGD_931_HTA.CEL.gz	23.6 Mb	(ftp)(http)	CEL
GSE222532_PGD_932_HTA.CEL.gz	23.7 Mb	(ftp)(http)	CEL
GSE222532_RAW.tar	233.7 Mb	(http)(custom)	TAR (of CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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