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Series GSE218722 Query DataSets for GSE218722
Status Public on Nov 29, 2022
Title PD-L1 regulates inflammatory programs of macrophages from human pluripotent stem cells.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary CRISPR knock-out combined with flow cytometry and scRNA-seq show that PD-L1 ablation compromises macrophage development from human pluripotent stem cells
 
Overall design PD-L1 is detected to be sharply expressed in only macrophages, and through PD-L1 knock-out by CRISPR, we found a surge decrease of macrophage population developed from human pluripotent stem cells, by flow cytometry. ScRNA-seq of wild-type and PD-L1 knock-out sample was used to characterize the difference of macrophages between them.
Web link https://pubmed.ncbi.nlm.nih.gov/37949473/
 
Contributor(s) Sugimura R, Cao H, Xiang D, Zhang S
Citation(s) 37949473
Submission date Nov 25, 2022
Last update date Dec 05, 2023
Contact name Shihui ZHANG
E-mail(s) shihuizhang974@gmail.com
Organization name Centre for Translational Stem Cell Biology Limited
Street address Science and Technology W Ave
City Hong Kong
ZIP/Postal code 999077
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM6755678 wild type sample
GSM6755679 PD-L1 knock-out sample
Relations
BioProject PRJNA905351

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218722_RAW.tar 655.1 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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