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Series GSE215065 Query DataSets for GSE215065
Status Public on Jan 30, 2023
Title Regulation of mouse chamber selective enhancers
Organisms Mus musculus; synthetic construct
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36705030
Submission date Oct 07, 2022
Last update date Feb 03, 2023
Contact name Xiaoran Zhang
E-mail(s) xiaoran.zhang@childrens.harvard.edu
Phone 8574259855
Organization name Boston Children's Hospital
Department Cardiology
Lab Pu lab
Street address 14 Perkins Square, Apt 11
City Jamaica Plain
State/province MA
ZIP/Postal code 02130
Country USA
 
Platforms (3)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL26526 Illumina NovaSeq 6000 (synthetic construct)
Samples (82)
GSM6620023 input
GSM6620024 Gata4_A1
GSM6620025 Gata4_A2
This SuperSeries is composed of the following SubSeries:
GSE215019 BioChIP-seq analysis of atrial and ventricular cardiomyocytes
GSE215020 Generate 3D genome database for atrial and ventricles and using chamber selective chromatin loops link a subset of CSEs to target genes
GSE215021 Next-generation sequencing facilitates quantitative analysis of atrial and ventricular cardiomyocytes transcriptomes
Relations
BioProject PRJNA888148

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE215065_RAW.tar 14.3 Gb (http)(custom) TAR (of BW, TXT)
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