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Series GSE21488 Query DataSets for GSE21488
Status Public on Nov 01, 2010
Title Genome-wide target discovery of transcripton factor E2F4 by ChIP-seq
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The transcription factor E2F4 is a member of the E2F family of regulators which has critical roles in cell cycle control and differentiation. In order to fully understand the physiological roles of E2F4 and the regulatory networks it mediates, and to reveal its relationships with other members of the E2F family, it is essential to comprehensively identify E2F4 target sites throughout the genome. Here, we investigated genome-wide E2F4 targets in human lymphoblastoid cells using the recently developed unbiased target discovery technique of ChIP sequencing.
 
Overall design We sequecned E2F4 ChIP and corresponding Input
 
Contributor(s) Lee B, Bhinge AA, Iyer VR
Citation(s) 21247883
Submission date Apr 23, 2010
Last update date May 15, 2019
Contact name Vishy Iyer
E-mail(s) iyerlab@gmail.com
Phone 5122327833
Organization name University of Texas at Austin
Department Institute for Cell and Molecular Biology
Street address 2500 Speedway Dr. MBB 3.212
City Austin
State/province TX
ZIP/Postal code 78712
Country USA
 
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (2)
GSM537063 GM06990_E2F4_ChIP_seq
GSM537064 GM06990_Input_seq
This SubSeries is part of SuperSeries:
GSE21489 Wide-ranging fucntions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis
Relations
SRA SRP002403
BioProject PRJNA129517

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21488_RAW.tar 904.7 Mb (http)(custom) TAR (of TXT, WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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