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| Status |
Public on Nov 16, 2022 |
| Title |
Inhibition of LIFR blocks adiposity driven endometrioid endometrial cancer growth |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We examined the mechanisms by which adiposity regulates EEC progression. EEC cells were incubated with or without adipocyte conditioned medium (ADP-CM), and total RNA was isolated for RNA-seq analysis. Our results demonstrated that ADP-CM stimulated EEC cells showed upregulation of several LIF/LIFR modulated pathways including Jak/STAT and cytokine pathways.
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| Overall design |
Total RNA from RL95-2 control, and ADP-CM cells were isolated using RNeasy mini kit (Qiagen). For whole-genome transcriptome profiling, 2 libraries (3 replicates from each group) were generated using a TruSeq Stranded mRNA Library Preparation kit according to the manufacturer’s protocol (Illumina Inc.). Samples were sequenced on the Illumina HiSeq 3000 platform (Illumina Inc.) using the 50 base-pair single-read (50SR) sequencing module.
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| Contributor(s) |
Vadlamudi RK, Viswanadhapalli S, Chen Y, Lai Z |
| Citation(s) |
36358818 |
| |
| Submission date |
Oct 05, 2022 |
| Last update date |
May 05, 2025 |
| Contact name |
Zhao Lai |
| E-mail(s) |
laiz@uthscsa.edu
|
| Organization name |
university of texas health science center at san antonio
|
| Department |
GCCRI
|
| Lab |
Genome Sequencing Facility
|
| Street address |
8403 Floyd Curl, MC 7784
|
| City |
San Antonio |
| State/province |
TX |
| ZIP/Postal code |
78229 |
| Country |
USA |
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| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA887435 |
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