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Series GSE214113 Query DataSets for GSE214113
Status Public on May 31, 2023
Title Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation [scRNA-seq_PostInfection]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Here, we discovered a reciprocal antagonism between Stat5a and Tox in TEX cells. Stat5a antagonized the Tox-mediated exhaustion program to achieve a durable and protective hybrid effector/NK-like differentiation state in settings that typically drive exhaustion. Stat5 also drove TEX progenitors to differentiate into the effector-like TEXint subset, a key developmental step for PD-1 blockade responsiveness.
 
Overall design P14 CD8 Tcells post infection were assayed using 10x scRNAseq
 
Contributor(s) Beltra JC, Wherry EJ
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Submission date Sep 24, 2022
Last update date Jun 02, 2023
Contact name E JOHN WHERRY
Organization name University of Pennsylvania
Department Systems Pharmacology and Translational Therapeutics,Institute for Immunology
Street address 421 Curie Blvd,354 BRB II/III
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM6599281 P14, Empty
GSM6599282 P14, Stat5CA
GSM6599283 P14, IL2Rb ortho
This SubSeries is part of SuperSeries:
GSE214116 Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation
Relations
BioProject PRJNA883968

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214113_RAW.tar 45.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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