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Series GSE212973 Query DataSets for GSE212973
Status Public on Jan 11, 2023
Title The multivalency of the glucocorticoid receptor ligand-binding domain explains its manifold physiological activities
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The glucocorticoid receptor (GR) is a ubiquitously expressed transcription factor that controls metabolic and homeostatic processes essential for life. Although numerous crystal structures of the GR ligand-binding domain (GR-LBD) have been reported, the functional oligomeric state of the full-length receptor (FL-GR), which is essential for its transcriptional activity, remains disputed. Here we present five new crystal structures of agonist-bound GR-LBD, along with a thorough analysis of previous structural work. We identify four distinct homodimerization interfaces on the GR-LBD surface, which can associate into 20 topologically different homodimers. Biologically relevant homodimers were identified by studying a battery of GR point mutants including crosslinking assays in solution, quantitative fluorescence microscopy in living cells, and transcriptomic analyses. Our results highlight the relevance of non-canonical dimerization modes for GR, especially of contacts made by loop L1-3 residues such as Tyr545. Our work illustrates the unique flexibility of GR’s LBD and suggest many dimeric conformations can coexist within cells. In addition, we unveil pathophysiologically relevant quaternary assemblies of the receptor with important implications for glucocorticoid action and drug design.
 
Overall design Comparative gene expression profiling analyses of RNA-seq data of dexamethasone treated mammary adenocarcinoma 3617-derived GRKO cells stably expressing GFP-tagged versions of mouse GR (WT, Y551A, Y551A-Dim, D647V, D647V-Tetra).
 
Contributor(s) Jiménez-Panizo A, Alegre-Martí A, Tettey TT, Fettweis G, Abella M, Antón R, Johnson TA, Schiltz RL, Kim S, Nuñez-Barrios I, Font-Díaz J, Caelles C, Valledor AF, Pérez P, Rojas AM, Fernández-Recio J, Presman DM, Hager GL, Fuentes-Prior P, Estébanez-Perpiñá E
Citation(s) 36464162
Submission date Sep 08, 2022
Last update date Jan 12, 2023
Contact name Gordon Hager
Organization name NIH
Department NCI
Lab LRBGE
Street address 41 Center Dr
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (34)
GSM6567846 mGRwt_Dex_1 GH4280
GSM6567847 mGRwt_Dex_2 GH4281
GSM6567848 mGRwt_Dex_3 GH4282
Relations
BioProject PRJNA878538

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Supplementary file Size Download File type/resource
GSE212973_RAW.tar 126.4 Mb (http)(custom) TAR (of TXT)
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Raw data are available in SRA
Processed data provided as supplementary file

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