|
| Status |
Public on May 31, 2023 |
| Title |
Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution. |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
37468485 |
| |
| Submission date |
Aug 18, 2022 |
| Last update date |
Sep 12, 2023 |
| Contact name |
kenian chen |
| E-mail(s) |
chenkn007@gmail.com
|
| Organization name |
UTsouthwestern
|
| Department |
Population and Data Science
|
| Lab |
Quantitative Biological Research Center
|
| Street address |
5323 Harry Hines Boulevard
|
| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (16)
|
| GSM6475252 |
H3K27Ac_ biol rep2 |
| GSM6475253 |
Maf_biol rep1 |
| GSM6475254 |
Maf_biol rep2 |
| GSM6475255 |
WT_hindlimb_skeletal_muscle_E14.5 [snATAC-seq] |
| GSM6475256 |
WT_hindlimb_skeletal_muscle_E18.5 [snATAC-seq] |
| GSM6475257 |
WT_hindlimb_skeletal_muscle_P5 [snATAC-seq] |
| GSM6475258 |
WT_hindlimb_skeletal_muscle_Adult [snATAC-seq] |
| GSM6475259 |
Cacna1s-/-_hindlimb_skeletal_muscle_E18.5 [snATAC-seq] |
| GSM6475260 |
WT_hindlimb_skeletal_muscle_E14.5 [snRNA-seq] |
| GSM6475261 |
WT_hindlimb_skeletal_muscle_E18.5 [snRNA-seq] |
| GSM6475262 |
WT_hindlimb_skeletal_muscle_P5 [snRNA-seq] |
| GSM6475263 |
WT_hindlimb_skeletal_muscle_Adult [snRNA-seq] |
| GSM6475264 |
Cacna1s-/-_hindlimb_skeletal_muscle_E18.5 [snRNA-seq] |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE211541 |
Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution [ChIP-seq] |
| GSE211542 |
Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution [snATAC-seq] |
| GSE211543 |
Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution [snRNA-seq] |
|
| Relations |
| BioProject |
PRJNA870873 |
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