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Series GSE211399 Query DataSets for GSE211399
Status Public on Aug 31, 2022
Title RNA-seq analysis of miR-2b-1 testes in Drosophila melanogaster
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We have identified that miR-2b-1 of D. melanogaster causes testicular bulging (a tumour like phenotype) and hence have performed a transcriptomic analysis on these bulged testes. Adult flies overexpressing miR-2b-1 were used to perform transcriptomic analysis to identify the differentially expressed genes.
 
Overall design Differential gene expression profiling analysis using RNA-seq data of Drosophila melanogaster miR-2b-1 overexpressing adult testes
 
Contributor(s) Manickam S, Thangadurai S, Azlan A, Abdul Halim M, Azzam G
Citation(s) 36426000
Submission date Aug 16, 2022
Last update date Nov 30, 2022
Contact name Ghows Azzam
E-mail(s) ghows@usm.my
Phone 60122026479
Organization name Universiti Sains Malaysia
Department School of Biological Sciences
Lab 418
Street address 1112 Jalan Persiaran Sains
City Gelugor
State/province Penang
ZIP/Postal code 11800
Country Malaysia
 
Platforms (1)
GPL21306 Illumina HiSeq 4000 (Drosophila melanogaster)
Samples (6)
GSM6469516 actin5C-Gal4>w1118 (Control) 1
GSM6469517 actin5C-Gal4>w1118 (Control) 2
GSM6469518 actin5C-Gal4>w1118 (Control) 3
Relations
BioProject PRJNA870103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211399_RAW.tar 480.0 Kb (http)(custom) TAR (of TAB)
GSE211399_edgeR_act-miR2b1.tab.gz 604.4 Kb (ftp)(http) TAB
GSE211399_edgeR_normcounts_act-miR2b1.tab.gz 621.2 Kb (ftp)(http) TAB
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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