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Series GSE211361 Query DataSets for GSE211361
Status Public on Oct 07, 2024
Title Type I Interferon promotes MxA-dependent IL-1b release in SLE monocytes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Systemic lupus erythematosus (SLE) is characterized by upregulation of Type Ι Interferon (IFN) and widespread inflammation. However, blocking the IFN pathway benefits a fraction of patients, pointing to additional pathogenic players. Here we describe monocytes (Mo) undergoing erythrophagocytosis and co-expressing IFN-inducible genes (ISGs) and interleukin-1b (IL-1b) in patients with active disease. This phenotype is recapitulated in vitro upon internalization of red blood cells carrying mitochondria (Mito+ RBCs), a feature of SLE. While ISG expression requires the interaction between Mito+ RBC-derived mitochondrial DNA (mtDNA) and cGAS, the production of IL-1b entails Mito+ RBC-derived mitochondrial RNA (mtRNA) triggering RIG-I-like receptor (RLR) activation. This leads to the cytosolic release of Mo-derived mtDNA and activation of the NLRP3 inflammasome. Importantly, the Type I IFN-inducible protein myxovirus resistant protein 1 (MxA) enables IL-1b release by routing this cytokine into a trans-Golgi network (TGN)-mediated unconventional secretory pathway. As Type I IFN and IL-1b are thought to counter-regulate each other, our study highlights an unprecedented synergy between these two cytokine pathways in SLE.
 
Overall design Human Monocytes (Mo) or BLaER1 Mo were cocultured with CFSE labeled red blood cells carrying (Mito+) or not carrying (Mito-) RBCs in complete RPMI medium. 18 hr later Mo or BLaER1 Mo internalizing RBCs were FACS sorted and processesed for RNAseq analysis
 
Contributor(s) Caielli S, Balasubramanian P, Balaji U, Wan Z, Baisch J, Walters L, Smitherman C, Nehar-Belaid D, Marches R, Nassi L, Stewart K, Fuller J, Banchereau JF, Gu J, Wright T, Pascual V
Citation(s) 39378884
Submission date Aug 16, 2022
Last update date Jan 06, 2025
Contact name Simone Caielli
E-mail(s) sic2011@med.cornell.edu
Organization name Weill Cornell Medicine
Department Department of Pediatrics
Street address 413 E 69th Street
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM6467385 Human Mo internalizing Mito- RBCs
GSM6467386 Human Mo internalizing Mito+ RBCs
GSM6467387 BLaER1 Mo internalizing Mito- RBCs
Relations
BioProject PRJNA869965

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211361_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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