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Series GSE211178 Query DataSets for GSE211178
Status Public on Jun 20, 2023
Title The hyperconnected 3D clique at the Ets1 locus is required for T cell function
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37263273
Submission date Aug 13, 2022
Last update date Aug 12, 2024
Contact name Golnaz Vahedi
E-mail(s) vahedi@pennmedicine.upenn.edu
Phone 215-898-8439
Organization name University of Pennsylvania
Department Department of Genetics
Lab Vahedi Lab
Street address 421 Curie Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (3)
GPL21626 NextSeq 550 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (67)
GSM6454810 ATAC-seq_naive_CD4_WT_Rep1B_Rep1T
GSM6454811 ATAC-seq_naive_CD4_WT_Rep1B_Rep2T
GSM6454812 ATAC-seq_naive_CD4_ETS1-SE-KO_Rep1B_Rep1T
This SuperSeries is composed of the following SubSeries:
GSE211173 The hyperconnected 3D clique at the Ets1 locus is required for T cell function (ATAC-Seq)
GSE211174 The hyperconnected 3D clique at the Ets1 locus is required for T cell function (CUT&RUN)
GSE211176 The hyperconnected 3D clique at the Ets1 locus is required for T cell function (Hi-C)
Relations
BioProject PRJNA869315

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211178_RAW.tar 8.3 Gb (http)(custom) TAR (of BED, HIC, TSV)
SRA Run SelectorHelp
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