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Series GSE210914 Query DataSets for GSE210914
Status Public on Jan 31, 2024
Title Quiescence Enables Unrestricted Cell Fate in Naive Embryonic Stem Cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This project will include 42 datasets (24 RNA-seq datasets, 8 CUT&RUN datasets, 4 ATAC-seq datasets, and 6 CRISPR target bisulfite-seq datasets), generated from illumine Hi-seq sequencer to investigate the stem cell quiescence in mouse embryonic stem cells.
 
Overall design Expression profiling by high throughput sequencing, Genome binding/occupancy profiling by high throughput sequencing, Elf5 promoter methylation profiling by CRISPR sequencing.
 
Contributor(s) Dou Y, Phuc Khoa LT
Citation(s) 38409226
Submission date Aug 10, 2022
Last update date Mar 07, 2024
Contact name Wentao Yang
E-mail(s) wentaoy@usc.edu
Organization name university of southern california
Street address 1441 Eastlake Ave
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (24)
GSM6442922 TMRM_RNAseq_High_1
GSM6442923 TMRM_RNAseq_High_2
GSM6442924 TMRM_RNAseq_Low_1
This SubSeries is part of SuperSeries:
GSE210915 Quiescence Enables Unrestricted Cell Fate in Naive Embryonic Stem Cells
Relations
BioProject PRJNA868312

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE210914_DmsovsMyc.fpkm.xls.gz 76.7 Mb (ftp)(http) XLS
GSE210914_H2ovsEto.fpkm.xls.gz 79.3 Mb (ftp)(http) XLS
GSE210914_HetvsEed.fpkm.xls.gz 83.5 Mb (ftp)(http) XLS
GSE210914_LowSAM25vs50.fpkm.xls.gz 76.9 Mb (ftp)(http) XLS
GSE210914_genes.highvslow.fpkm.txt.gz 60.9 Mb (ftp)(http) TXT
GSE210914_siCtrvsMat2a.fpkm.xls.gz 77.6 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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