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| Status |
Public on Apr 04, 2024 |
| Title |
Enhanced CLIP (eCLIP) identified differential UPF1 binding sites in mouse neural progenitor cells (NPCs) samples |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
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| Summary |
As one of the key RNA regulation pathway, the NMD pathway plays a key role in the early brain development. The investigation of UPF1 specific binding transcript in mouse NPCs samples could give us a overall view of potential genes which are subjected to the NMD regulation. Among these genes we could identify how the NMD pathway shapes early mouse brian development.
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| Overall design |
eCLIP-seq with UPF1 specific antibody in mouse NPCs samples
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| Contributor(s) |
Zhao J, Blue S, Yee B, Yeo GW, Zheng S |
| Citation missing |
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| |
| Submission date |
Aug 03, 2022 |
| Last update date |
Apr 05, 2024 |
| Contact name |
Gene Yeo |
| E-mail(s) |
geneyeo@ucsd.edu
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| Organization name |
UCSD
|
| Street address |
2880 Torrey Pines Scenic Dr. Room 3805/Yeo Lab
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| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA865731 |
