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Series GSE206765 Query DataSets for GSE206765
Status Public on May 31, 2023
Title Comparing the microbiota composition between Cocaine addicted and Healthy subjects and the corresponding shift caused by rTMS treatment.
Organism Homo sapiens
Experiment type Other
Summary Total DNA was extracted from saliva and stool of the patients, amplified to collect amplicons of variable V3–V4 regions of the bacterial 16s rRNA gene and sequenced with MiSeq (2x300bp) Illumina platform.
 
Overall design Total DNA was extracted from saliva and stool of Cocaine addicted and Healthy subjects
 
Contributor(s) Ramazzotti M, Amedei A, Baldi S, Di Gloria L, Gerace E, Curini L
Citation(s) 37250301
Submission date Jun 23, 2022
Last update date May 31, 2023
Contact name Matteo Ramazzotti
E-mail(s) matteo.ramazzotti@unifi.it
Organization name University of Florence
Department Experimental and Clinical Biomedical Sciences
Street address viale Morgagni 50
City Firenze
ZIP/Postal code 50134
Country Italy
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (159)
GSM6261983 Microbiota of Saliva from patient Healthy_13 [FL10]
GSM6261984 Microbiota of Saliva from patient Healthy_14 [FL12]
GSM6261985 Microbiota of Saliva from patient Healthy_12 [FL2]
Relations
BioProject PRJNA852082

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206765_dna_sequences_saliva.fasta.gz 274.6 Kb (ftp)(http) FASTA
GSE206765_dna_sequences_stool.fasta.gz 264.6 Kb (ftp)(http) FASTA
GSE206765_feature_table_saliva.csv.gz 139.1 Kb (ftp)(http) CSV
GSE206765_feature_table_stool.csv.gz 122.7 Kb (ftp)(http) CSV
GSE206765_taxonomy_saliva.tsv.gz 123.9 Kb (ftp)(http) TSV
GSE206765_taxonomy_stool.tsv.gz 123.0 Kb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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