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Series GSE205236 Query DataSets for GSE205236
Status Public on Mar 25, 2024
Title BRG1 programs PRC2-complex repression and controls oligodendrocyte differentiation and remyelination
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mutations in Brg1 can cause Coffin-Siris syndrome, where a patient had white matter defects and partial agenesis of the corpus callosum; however, Brg1 functions in CNS myelination and remyelination is unsure. We show that PDGFRa expressed prior than NG2, depletion of Brg1 at PDGFRα+ OPC leads to OPC differentiation restriction and myelin defects, also, Brg1 is critical for oligodendrocyte remyelination. Genomic occupancy and transcriptome analyses indicate that Brg1 promotes H3K27me3 and neuronal genes. Thus our findings reveal that Brg1 is a critical epigenetic programmer of CNS myelination and repair through recruiting H3K27me3 and neuronal genes, suggesting potential strategies of therapeutic intervention for Brg1-associated white matter defects.
 
Overall design 2 Control Samples and 2 Mutant
Web link https://pubmed.ncbi.nlm.nih.gov/38652118/
 
Contributor(s) Wang J, Yang L, Lu QR
Citation(s) 38652118
Submission date Jun 01, 2022
Last update date Jun 24, 2024
Contact name Richard Lu
Organization name Cincinnati Children's Hospital Medical Center
Department CBDI
Lab Lu Lab,T6.525
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM6208920 CTRL-1_S21
GSM6208921 CTRL-2_S22
GSM6208922 Brg1cko-1_S23
Relations
BioProject PRJNA844228

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE205236_RAW.tar 3.1 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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