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| Status |
Public on Jan 25, 2023 |
| Title |
A combinatorial approach to uncover a novel Integrator subunit |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
36920904 |
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| Submission date |
May 26, 2022 |
| Last update date |
Sep 11, 2023 |
| Contact name |
Sarah R Offley |
| E-mail(s) |
offley@upenn.edu, soffley@wistar.org, Sarah.offley@pennmedicine.upenn.edu
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| Organization name |
The Wistar Institute
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| Lab |
Alessandro Gardini
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| Street address |
3601 Spruce St
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| City |
Philadelphia |
| State/province |
Pennsylvania |
| ZIP/Postal code |
19103 |
| Country |
USA |
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| Platforms (2) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL30173 |
NextSeq 2000 (Homo sapiens) |
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| Samples (40)
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| GSM6202138 |
HeLa, shC7orf26, EGF, Biol rep 1 |
| GSM6202139 |
HeLa ,shLUC, Control, Biol rep 2 |
| GSM6202140 |
HeLa, shC7orf26, Control, Biol rep 2 |
| GSM6202141 |
HeLa, shLUC, EGF, Biol rep 2 |
| GSM6202142 |
HeLa, shC7orf26, EGF, Biol rep 2 |
| GSM6202143 |
HeLa ,shLUC, Control, Biol rep 3 |
| GSM6202144 |
HeLa, shC7orf26, Control, Biol rep 3 |
| GSM6202145 |
HeLa, shLUC, EGF, Biol rep 3 |
| GSM6202146 |
HeLa, shC7orf26, EGF, Biol rep 3 |
| GSM6202497 |
HL-60, NT, C7orf26, biol rep1 |
| GSM6202498 |
HL-60, PMA, C7orf26, biol rep1 |
| GSM6202499 |
HL-60, NT, C7orf26, biol rep2 |
| GSM6202500 |
HL-60, PMA, C7orf26, biol rep2 |
| GSM6202501 |
HeLa, Ctrl, C7orf26, biol rep1 |
| GSM6202502 |
HeLa, EGF, C7orf26, biol rep1 |
| GSM6202503 |
HeLa, Ctrl, C7orf26, biol rep2 |
| GSM6202504 |
HeLa, EGF, C7orf26, biol rep2 |
| GSM6202505 |
HeLa, shC7orf26, Ctrl, RNAPII, biol rep1 |
| GSM6202506 |
HeLa, shC7orf26, EGF, RNAPII, biol rep1 |
| GSM6202507 |
HeLa, shLUC, Ctrl, RNAPII, biol rep1 |
| GSM6202508 |
HeLa, shLUC, EGF, RNAPII, biol rep1 |
| GSM6202509 |
HeLa, shLUC, Ctrl, RNAPII, biol rep2 |
| GSM6202510 |
HeLa, shLUC, EGF, RNAPII, biol rep2 |
| GSM6202511 |
HeLa, shC7orf26, Ctrl, RNAPII, biol rep2 |
| GSM6202512 |
HeLa, shC7orf26, EGF, RNAPII, biol rep2 |
| GSM6944629 |
HL-60, NT, INTS10, biol rep1 |
| GSM6944630 |
HL-60, PMA, INTS10, biol rep1 |
| GSM6944631 |
HL-60, NT, INTS10, biol rep2 |
| GSM6944632 |
HL-60, PMA, INTS10, biol rep2 |
| GSM6944633 |
HeLa, Ctrl, INTS10, biol rep1 |
| GSM6944634 |
HeLa, EGF, INTS10, biol rep1 |
| GSM6944635 |
HeLa, Ctrl, INTS10, biol rep2 |
| GSM6944636 |
HeLa, EGF, INTS10, biol rep2 |
| GSM6944637 |
HeLa, Ctrl, C7orf26, Serum 1, biol rep1 |
| GSM6944638 |
HeLa, EGF, C7orf26, Serum 1, biol rep1 |
| GSM6944639 |
HeLa, Ctrl, C7orf26, Serum 1, biol rep2 |
| GSM6944640 |
HeLa, EGF, C7orf26, Serum 1, biol rep2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE204905 |
A combinatorial approach to uncover a novel Integrator subunit [RNA-seq] |
| GSE204932 |
A combinatorial approach to uncover a novel Integrator subunit [ChIP-seq I] |
| GSE223296 |
A combinatorial approach to uncover a novel Integrator subunit [ChIP-seq II] |
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| Relations |
| BioProject |
PRJNA842741 |
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