|
| Status |
Public on May 18, 2022 |
| Title |
Activation of TnSmu1, an integrative and conjugative element, is lethal to Streptococcus mutans |
| Organism |
Streptococcus mutans |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq was utilized to compare the transcriptomes of a CRISPRi control strain and a CRISPRi strain targeting/repressing SMU_218
|
| |
|
| Overall design |
Streptococcus mutans mRNA profiles were generated for a CRISPRi control strain and a CRISPRi strain targeting/repressing SMU_218 by deep sequencing, in triplicate
|
| |
|
| Contributor(s) |
Shields RC |
| Citation(s) |
36201342 |
| |
| Submission date |
May 11, 2022 |
| Last update date |
Aug 28, 2023 |
| Contact name |
Robert Colquhoun Shields |
| E-mail(s) |
rshields@astate.edu
|
| Organization name |
Arkansas State University
|
| Department |
Biological Sciences
|
| Lab |
Shields
|
| Street address |
Lab Science East
|
| City |
Jonesboro |
| State/province |
Arkansas |
| ZIP/Postal code |
72467 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21130 |
Illumina NextSeq 500 (Streptococcus mutans) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA837282 |
Less...
More...